DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and sds22

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_593824.1 Gene:sds22 / 2543597 PomBaseID:SPAC4A8.12C Length:332 Species:Schizosaccharomyces pombe


Alignment Length:193 Identity:50/193 - (25%)
Similarity:91/193 - (47%) Gaps:29/193 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IKEALKRWEEREQQNSLTAKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEKIFGLSGMKC 71
            ::..::|.|..|..:.||    :|:.....|..::: |.|||..|::.:..|.|.|......::.
pombe   134 VQNRIRRIENLEGLDRLT----NLELGGNKIRVIEN-LDTLVNLEKLWVGKNKITKFENFEKLQK 193

  Fly    72 LKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLIKD------- 129
            |.:||:..|.|.|...|..::..|.||::|:|.:....|:..|:.|::|.:|||:||.       
pombe   194 LSLLSIQSNRITQFENLACLSHCLRELYVSHNGLTSFSGIEVLENLEILDVSNNMIKHLSYLAGL 258

  Fly   130 ------WSEFNRLAEIESLED----------LVVVGNPLSEGLDEPTWRAECIKRLPTIRKLD 176
                  |:..|.|:..:.:||          :...||||.: .:...:|.:....||.:|::|
pombe   259 KNLVELWASNNELSSFQEIEDELSGLKKLETVYFEGNPLQK-TNPAVYRNKVRLCLPQLRQID 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 44/163 (27%)
leucine-rich repeat 50..71 CDD:275380 4/20 (20%)
leucine-rich repeat 95..116 CDD:275380 7/20 (35%)
leucine-rich repeat 117..141 CDD:275380 10/36 (28%)
sds22NP_593824.1 leucine-rich repeat 64..83 CDD:275380
leucine-rich repeat 84..105 CDD:275380
PPP1R42 104..331 CDD:455733 50/193 (26%)
leucine-rich repeat 106..127 CDD:275380
leucine-rich repeat 128..149 CDD:275380 3/14 (21%)
leucine-rich repeat 150..171 CDD:275380 7/25 (28%)
leucine-rich repeat 172..193 CDD:275380 4/20 (20%)
leucine-rich repeat 194..215 CDD:275380 7/20 (35%)
leucine-rich repeat 217..238 CDD:275380 7/20 (35%)
leucine-rich repeat 239..260 CDD:275380 7/20 (35%)
leucine-rich repeat 261..286 CDD:275380 5/24 (21%)
Blue background indicates that the domain is not in the aligned region.

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