DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and sds-22

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_495653.1 Gene:sds-22 / 174266 WormBaseID:WBGene00011637 Length:326 Species:Caenorhabditis elegans


Alignment Length:188 Identity:54/188 - (28%)
Similarity:92/188 - (48%) Gaps:20/188 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSKATTIKEALKRWEEREQQNSLT-AKVIDLQFQWPPIEKMDSTLGTLVQCERISMSTNMIEKIF 64
            ::|..|:.....:.|:.|...:|| .|:::|...  .|:|::: :|.||..:.:.:..|.|.::.
 Worm   124 LTKLETLYLVSNKIEKIENLEALTQLKLLELGDN--RIKKIEN-IGHLVNLDELFIGKNKIRQLE 185

  Fly    65 GLSGMKCLKVLSLSRNYIKQISGLEAVAETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLIKD 129
            |:..::.|.||||..|.|.:|..:|.: ..|:||:||...::.|.|:..|..|.:|.::||.||.
 Worm   186 GVETLQKLSVLSLPGNRIVKIENVEQL-NNLKELYLSDQGLQDIHGVEPLTNLLLLDVANNEIKT 249

  Fly   130 WSEFNRLAEIESLEDLVVVGNPLSEGLDEPTWRAECIKRLPTIRKLDG-EPVVLNEEP 186
            :|...||   |||.|.....|           :.|....:..:.||.| :.|.|...|
 Worm   250 FSGVERL---ESLNDFWANDN-----------KVESFSEIEQLSKLKGLQTVYLERNP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 43/143 (30%)
leucine-rich repeat 50..71 CDD:275380 3/20 (15%)
leucine-rich repeat 95..116 CDD:275380 8/20 (40%)
leucine-rich repeat 117..141 CDD:275380 9/23 (39%)
sds-22NP_495653.1 leucine-rich repeat 40..59 CDD:275380
leucine-rich repeat 60..82 CDD:275380
LRR_8 82..137 CDD:404697 2/12 (17%)
leucine-rich repeat 83..104 CDD:275380
leucine-rich repeat 105..126 CDD:275380 0/1 (0%)
PPP1R42 124..317 CDD:455733 54/188 (29%)
leucine-rich repeat 127..148 CDD:275380 4/20 (20%)
leucine-rich repeat 149..170 CDD:275380 6/23 (26%)
leucine-rich repeat 171..192 CDD:275380 3/20 (15%)
leucine-rich repeat 193..214 CDD:275380 9/21 (43%)
leucine-rich repeat 215..236 CDD:275380 8/20 (40%)
leucine-rich repeat 256..283 CDD:275380 9/40 (23%)
Blue background indicates that the domain is not in the aligned region.

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