DRSC/TRiP Functional Genomics Resources

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Protein Alignment ODA-Dnal1 and sycp2l

DIOPT Version :10

Sequence 1:NP_610483.1 Gene:ODA-Dnal1 / 35962 FlyBaseID:FBgn0033408 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_012820868.2 Gene:sycp2l / 100101666 XenbaseID:XB-GENE-919974 Length:997 Species:Xenopus tropicalis


Alignment Length:46 Identity:13/46 - (28%)
Similarity:17/46 - (36%) Gaps:9/46 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 ETLEELWLSYNLIEKIKGLTGLKCLKVLYISNNLIKDWSEFNRLAE 138
            |.||..|:.:|        .|.:|:. .||.|.....|.....|.|
 Frog   320 ENLESFWIDFN--------AGSQCVS-FYIHNKEGSLWDSVRLLKE 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ODA-Dnal1NP_610483.1 PPP1R42 37..180 CDD:455733 13/46 (28%)
leucine-rich repeat 50..71 CDD:275380
leucine-rich repeat 95..116 CDD:275380 5/20 (25%)
leucine-rich repeat 117..141 CDD:275380 6/22 (27%)
sycp2lXP_012820868.2 SYCP2_ARLD 36..207 CDD:465809
SYCP2_SLD 299..408 CDD:465811 13/46 (28%)
Blue background indicates that the domain is not in the aligned region.

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