DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myd88 and IL18RAP

DIOPT Version :9

Sequence 1:NP_001260821.1 Gene:Myd88 / 35956 FlyBaseID:FBgn0033402 Length:537 Species:Drosophila melanogaster
Sequence 2:NP_001380415.1 Gene:IL18RAP / 8807 HGNCID:5989 Length:599 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myd88NP_001260821.1 DD 90..172 CDD:301326
TIR_2 242..375 CDD:304906
IL18RAPNP_001380415.1 Ig_6 100..155 CDD:408247
Ig 162..>221 CDD:416386
Ig strand A 162..166 CDD:409353
Ig strand B 171..175 CDD:409353
Ig strand C 188..193 CDD:409353
Ig strand C' 196..198 CDD:409353
Ig strand E 204..209 CDD:409353
Ig 251..354 CDD:416386
Ig strand A 251..254 CDD:409353
Ig strand A' 262..265 CDD:409353
Ig strand B 267..276 CDD:409353
Ig strand C 285..290 CDD:409353
Ig strand D 300..308 CDD:409353
Ig strand E 315..323 CDD:409353
Ig strand F 334..340 CDD:409353
Ig strand G 344..350 CDD:409353
TIR 419..559 CDD:396246
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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