Protein Alignment Myd88 and Tirap

DIOPT Version :9

• Sequence 1: NP_001260821.1
• Gene: Myd88 / 35956
• FlyBaseID: FBgn0033402
• Length: 537
• Species: Drosophila melanogaster
• Sequence 2: XP_001055833.2
• Gene: Tirap / 680127
• RGDID: 1595496
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 190
• Identity: 47/190 - (24%)
• Similarity: 80/190 - (42%)
• Gaps: 27/190 - (14%)

  Fly   167 VCDDIQENLAKDTQRFIMKQEQR-----QTALVEACPP-----PPSDCFETNNNYSSSNNITVGQ 221
            :.|..::.|.|..::..:.||..     |||..:...|     |.|  ..::.:.||:.:.:.|.
  Rat    29 IADWFRQALLKKPKKMPISQESHLSDGSQTATQDGLSPSSGSSPRS--HSSSQSQSSTPSCSSGM 91

  Fly   222 S-----VQILSDEDQRCVQMGQPLPRYNACVLYAEADIDHATEIMNNLESERYNLRLFLRHRDML 281
            |     ..:.|....   ..|:....|:.||.::|.|::.|.|:::.||..:.:||.||:.||..
  Rat    92 SPTSPPTHVDSSSSS---SSGRWSKDYDVCVCHSEEDLEVAQELVSYLEGSKASLRCFLQFRDAA 153

  Fly   282 MGVPFEHVQLSHFMATRCNHLIVVLTEEFLRSPENTY--LVNFTQKIQIENHTRKIIPIL 339
            .|.............:.|.  ::::|..|||.|...|  |...|:....|..|   ||:|
  Rat   154 PGGAIVSELCQALSGSHCR--VLLITPGFLRDPWCKYQMLQALTEAPGSEGCT---IPLL 208

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Myd88	NP_001260821.1	DD	90..172	CDD:301326	1/4 (25%)
		TIR_2	242..375	CDD:304906	30/100 (30%)
Tirap	XP_001055833.2	TIR_2	117..232	CDD:404550	29/97 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910