DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myd88 and TOLL5A

DIOPT Version :9

Sequence 1:NP_001260821.1 Gene:Myd88 / 35956 FlyBaseID:FBgn0033402 Length:537 Species:Drosophila melanogaster
Sequence 2:XP_560220.3 Gene:TOLL5A / 3289806 VectorBaseID:AGAP000999 Length:1057 Species:Anopheles gambiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myd88NP_001260821.1 DD 90..172 CDD:301326
TIR_2 242..375 CDD:304906
TOLL5AXP_560220.3 leucine-rich repeat 98..121 CDD:275380
leucine-rich repeat 139..163 CDD:275380
LRR_8 211..269 CDD:290566
LRR_4 211..250 CDD:289563
leucine-rich repeat 213..234 CDD:275380
LRR_4 233..274 CDD:289563
leucine-rich repeat 235..258 CDD:275380
leucine-rich repeat 259..282 CDD:275380
leucine-rich repeat 283..308 CDD:275380
LRR_RI 300..531 CDD:238064
LRR_8 309..367 CDD:290566
leucine-rich repeat 309..332 CDD:275380
leucine-rich repeat 333..356 CDD:275380
LRR_8 357..416 CDD:290566
leucine-rich repeat 357..381 CDD:275380
leucine-rich repeat 382..405 CDD:275380
leucine-rich repeat 406..424 CDD:275380
leucine-rich repeat 431..470 CDD:275380
LRR_8 470..530 CDD:290566
leucine-rich repeat 471..494 CDD:275380
leucine-rich repeat 495..516 CDD:275380
leucine-rich repeat 589..705 CDD:275380
leucine-rich repeat 706..731 CDD:275380
TIR 843..981 CDD:214587
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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