DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mad1 and MAD1

DIOPT Version :10

Sequence 1:NP_610477.2 Gene:Mad1 / 35954 FlyBaseID:FBgn0026326 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_011429.3 Gene:MAD1 / 852794 SGDID:S000003054 Length:749 Species:Saccharomyces cerevisiae


Alignment Length:863 Identity:180/863 - (20%)
Similarity:324/863 - (37%) Gaps:260/863 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DIRSSIDDMMDRFNDSITHSAPKKLLFNRLSASFDL----GVSPNKRRRERESPERSLNDTASSL 63
            |:|:::.......:...|   .|||.....|..:.:    |.||     ..|||..|  ....|.
Yeast     2 DVRAALQCFFSALSGRFT---GKKLGLEIYSIQYKMSNSGGSSP-----FLESPGGS--PDVGST 56

  Fly    64 NMPANDSMASLQNSKLRTELIETKAIVIQLRNEIEKKSREHKEAILLAENKST------ALKDQC 122
            |..:|..:.:|| .||.|         :|...||||...:.:..||..:.|:|      ||.| .
Yeast    57 NGQSNRQIQALQ-FKLNT---------LQNEYEIEKLQLQKQTNILEKKYKATIDELEKALND-T 110

  Fly   123 DITSKKNLELQDDLKALRKRELVLKNEASRATAEL-----------NQLRLKFD----------- 165
            ....:.|.:|:.:||:|::|.....|:..:...||           ..||.::|           
Yeast   111 KYLYESNDKLEQELKSLKERSANSMNDKDKCIEELRTTLQNKDLEMETLRQQYDSKLSKVTNQCD 175

  Fly   166 ------EST----LKLQKEKYLQKEDARDVH----------------LCIN----------NELS 194
                  ||:    :|.:||...|..|.:|:.                ..||          |||:
Yeast   176 HFKLEAESSHSLLMKYEKEIKRQSVDIKDLQHQVMEKDDELSSVKASKMINSHPNYSTEEFNELT 240

  Fly   195 EYRRIAQ-----RADLELQSTR--NELERLRQL----------NEELQARASGFEQLRANHEKQT 242
            |..::.|     ..:|||.:.:  |||::|:|.          ||:||.:.|....|    |.|.
Yeast   241 EMNKMIQDQVQYTKELELANMQQANELKKLKQSQDTSTFWKLENEKLQNKLSQLHVL----ESQY 301

  Fly   243 QSLKVAN----DRIQELEFEIQSYSDWKEVVKTSRERLASVPDLLAEVEHLRSHNKHLNTLIGDK 303
            ::|::.|    .::.:.|....|..|....|..:.....:..|...:..:..|:|.::|.     
Yeast   302 ENLQLENIDLKSKLTKWEIYNDSDDDDDNNVNNNDNNNNNKNDNNNDNNNDTSNNNNINN----- 361

  Fly   304 LLLEEQVYDYKTRLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRSRIE 368
                    :.:|:.....              :.|:.:::| |:.:..||   :::.|..:.|::
Yeast   362 --------NNRTKNNIRN--------------NPEEIIRDW-KLTKKECL---ILTDMNDKLRLD 400

  Fly   369 QLLKEDIIHVAEKTSSASDTKHLNTTIRDLEHKCAIYLKNIEDLN-------IGLKRHKNFKERL 426
                                   |..::.|..:.|:....|.|||       :.|||..:  |..
Yeast   401 -----------------------NNNLKLLNDEMALERNQILDLNKNYENNIVNLKRLNH--ELE 440

  Fly   427 QRKLITVSKERDFYKQL-------------VENFDKDTTLSNASVADMTQDMQVRVRMEVLERTV 478
            |:|.::..:.|...:||             |||  .:|..||.:|   .:||         ...:
Yeast   441 QQKSLSFEECRLLREQLDGLYSAQNNALLEVEN--SETHASNKNV---NEDM---------NNLI 491

  Fly   479 TGYKDMCATLEREIQSLRQQ---------------ELVNEPAGEGYDSVKKELDTLRMENDRLRR 528
            ..||:....|..|::.|..|               :|.::..|..|   .:.|:.|::||..:.|
Yeast   492 DTYKNKTEDLTNELKKLNDQLLSNSNDVETQRKKRKLTSDQIGLNY---SQRLNELQLENVSVSR 553

  Fly   529 R--KEELEMEMMHRCLRGDFNMKD--FKVVHFSENPAAEAYESTKN---MMEKLQAE-IERLKRR 585
            .  |.:..::::...|.....:|:  .:::...:.|..:.....||   ::||..|: :..||:.
Yeast   554 ELSKAQTTIQLLQEKLEKLTKLKEKKIRILQLRDGPFIKDQFIKKNKLLLLEKENADLLNELKKN 618

  Fly   586 NKKLED------DNEQRLNETTSTGGMTLNFKEFNQLQAELESANGKMRKMRDCFKAAREEFRDV 644
            |..:|.      |              :||| |..|.:.|:..:|.:..:::..|.....||.||
Yeast   619 NPAVETVPISVYD--------------SLNF-ELKQFEQEVFKSNKRFSRLKQVFNNKSLEFIDV 668

  Fly   645 CYMLLGYRIDRIGANSNYRISSMFAEGPDDYLDISLNESNCLALLESP---YSHTFNPPIDQQLA 706
            ...|||:::: ...:|..:|.|.|.  |:.||...|||:...:.|::.   :....|..::.:  
Yeast   669 VNSLLGFKLE-FQQDSRVKIFSCFK--PEKYLIADLNENTLKSNLDADIEGWDDLMNLWVEDR-- 728

  Fly   707 ASNFPAFFSALTLELFQK 724
             ...|.|.:.:||.|:::
Yeast   729 -GQLPCFLATITLRLWEQ 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mad1NP_610477.2 MAD 80..726 CDD:461677 159/782 (20%)
MAD1NP_011429.3 MAD 83..747 CDD:461677 153/762 (20%)

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