DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mad1 and mad1l1

DIOPT Version :9

Sequence 1:NP_610477.2 Gene:Mad1 / 35954 FlyBaseID:FBgn0026326 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_001006927.1 Gene:mad1l1 / 448774 XenbaseID:XB-GENE-6258053 Length:718 Species:Xenopus tropicalis


Alignment Length:715 Identity:185/715 - (25%)
Similarity:341/715 - (47%) Gaps:67/715 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 LNDTASSLNMPANDSMASLQNSKLRTELIETKAIVIQLRNEIEKKSRE-------HKEAILLAEN 113
            |..||.||. .:..:.||||....:..|:|.:|..|:.::.:.:..||       ||.|.:..|.
 Frog    25 LEGTAPSLG-TSTSTGASLQMQFQQRFLLEDQAAQIRSKSHLIQVEREKMQMELSHKRARIELEK 88

  Fly   114 KSTALKDQCDITSKKNLELQDDLKALRKRELVLKNEASRATAELNQLRLKFDESTLKLQKEKYLQ 178
            .::......:..:.:|.||...:|||.:||    |:......|.|:: :|..:.|::.|.:|.|:
 Frog    89 AASTNAKNYEREADRNQELITRIKALEERE----NDFQNKLQEQNEM-IKSYKKTIEAQSKKLLE 148

  Fly   179 KEDARDVHLCINNELS---------EYRRIAQRADLELQSTRNELERLRQLNEELQARASGFEQL 234
            |||....   :|..:|         :::.:.|...::.|.|..: |...||....:......|::
 Frog   149 KEDKLSE---LNENISVLKGKATELQWKIMNQEMQIKTQETEKQ-EMTEQLEIHRKKLQESNEKM 209

  Fly   235 RANHEKQTQSLKVAND-RIQELEFEIQSYSDWKEVVKTSRERLASVPDLLAEVEHLRSHNKHLNT 298
            :|.||.|.|:  |.|: :|:.||.::.:......:||:.:..||.:|.|..|::.||..|.:...
 Frog   210 QALHELQAQN--VDNEQKIKSLEQKLSAQEQDAAIVKSMKSDLAKLPKLERELQQLRDENAYHRE 272

  Fly   299 LIGDKLLLEEQVYDYKTRLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMAL 363
            :..:..||:|:|...:...||....:.:...|:::...:.::||.|..:  :|.....:.:|..|
 Frog   273 MKENNALLKEEVEGLRRAAERFNKMKEDLVGLEIEKEQLLKKLKLWESL--EHTTGLNIRTPDDL 335

  Fly   364 RSRIEQLLKEDIIHVAEKTSSASDTKHLNTTIRDL-EHKCAIYLKNIEDLNIGLKRHKN---FKE 424
            ..:|..:.:.::....|..:..:..:.|.|:.:.| |....:....:|:    .||.::   |..
 Frog   336 SRQIIAVQQRELKLKEENMTIQNSARMLETSRQQLREELLKVQAGFLEE----KKRREHQEAFVR 396

  Fly   425 RLQRKLITVSKERDFYKQLVENFDKDTTLSNAS----------------VADMTQDMQVRVRMEV 473
            |||::::.::||||..:.:::::|.:.|.:..|                |.|...:|:.:: .|.
 Frog   397 RLQKRVLLLTKERDGMRAILDSYDSELTPTEHSPQLSRRLREAEDMVQKVQDHNAEMETQL-SEA 460

  Fly   474 LERTVTGYKDMCATLEREIQSLRQQELVNEP----AGEGYDSVKKELDTLRMENDRLRRRKEELE 534
            ||.|.. .|.....|..|::.|:.|...::.    ..|..::::.:::.|..|..||....:.||
 Frog   461 LEETGI-QKQKSDLLMAELKVLKSQMGSSDQNISFTNEAMNTLRLKIEELEAERGRLEEENKILE 524

  Fly   535 MEMMHRCLRGDFNMKDFKVVHFSENPAAEAYESTKNMMEKLQAEIERLKRRNKKLEDDNEQRLNE 599
            |.:....|:|.::....||:|...||:::|.:.....:.:||.|..:|:...:.||  ...::.:
 Frog   525 MRLERLNLQGCYDPSKTKVIHLGLNPSSQAKQQRAETVRQLQEECSKLRELVRILE--GGAQIPD 587

  Fly   600 TTSTGGMTLNFKEFNQLQAELESANGKMRKMRDCFKAAREEFRDVCYMLLGYRIDRIGANSNYRI 664
            .....|...:.:|..:|:.:||||..|.:::|:.|:....|||..||||.||||| |...:.||:
 Frog   588 KLEAAGSVQSSQELTELKKQLESAELKNQRLREVFQTKIHEFRTACYMLTGYRID-ITTENQYRL 651

  Fly   665 SSMFAEGPDDYL--DISLNESNCLALLESPYSHTFNPPIDQQLAASN-FPAFFSALTLELFQKAT 726
            :||:||..:|.|  ..|.:....:.|||:.:|.|....||..|...| .|||.||:||:||.:.|
 Frog   652 TSMYAEQKEDNLLFKASGSSGGKMQLLETDFSLTLRDFIDLHLHHQNSIPAFLSAVTLDLFSRQT 716

  Fly   727  726
             Frog   717  716

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mad1NP_610477.2 MAD 80..726 CDD:283261 175/689 (25%)
mad1l1NP_001006927.1 MAD 55..716 CDD:368498 173/682 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 200 1.000 Domainoid score I2974
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74500
Inparanoid 1 1.050 201 1.000 Inparanoid score I3653
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D483557at33208
OrthoFinder 1 1.000 - - FOG0004279
OrthoInspector 1 1.000 - - oto103468
Panther 1 1.100 - - LDO PTHR23168
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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