DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mad1 and mad1

DIOPT Version :10

Sequence 1:NP_610477.2 Gene:Mad1 / 35954 FlyBaseID:FBgn0026326 Length:730 Species:Drosophila melanogaster
Sequence 2:NP_595516.2 Gene:mad1 / 2540320 PomBaseID:SPBC3D6.04C Length:676 Species:Schizosaccharomyces pombe


Alignment Length:725 Identity:158/725 - (21%)
Similarity:315/725 - (43%) Gaps:118/725 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 PNKRRRERESPERSLNDTASSLNMPANDSMASLQNSKLRTEL-IETKAIVIQLRNEIEKKSREHK 105
            ||.::....|...:.|...:||..    .:.:|:|...|.|| .|.:.|.:|     .|.:.||:
pombe    26 PNLKKPSVNSANETKNPKLASLEF----QLENLKNDLKRKELEFEREQIELQ-----RKLAEEHE 81

  Fly   106 EAILLAENKSTALKDQCDITSKKNLELQDDLKALRKRELVLKNEASRATAELNQ-LRLKFDE-ST 168
            :        ..:|:.:..:..|   :|::...:.:|....::||......:::: |..|:.| :.
pombe    82 Q--------KNSLQLRLTLVEK---QLEEQSTSYQKEIEEVRNEKEATQVKIHELLDAKWKEIAE 135

  Fly   169 LKLQKEKYLQKEDARDVHLCINNELSEYRRIAQRADLELQSTR-NELERL-RQLNEELQARASGF 231
            ||.|.||..|....::..:.::|:.           |:::.|. ..||:| ....|:|:.:.   
pombe   136 LKTQIEKNDQALSEKNHEVMVSNQA-----------LQMKDTNLTNLEKLFADSREQLETKC--- 186

  Fly   232 EQLRANHEKQTQSLKVANDRIQELEFEIQSYSDWKEVVKTSRERLASVPDLLA----EVEHLRSH 292
            ::|.| .|:|.|.|.|.|.:::|...::.|..:.:::....|.:::.:..|.|    .:|.|.|:
pombe   187 KELAA-AEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSN 250

  Fly   293 NKHLNTLIGDKLLLEEQVYDYKTRLEREEGARAEAASLQVKLLHMEQELKEWVKVAQDHCLANTL 357
            |:::.       :|:|:..|.:::|.|.|..|.:.|:|:::...::.||..|..:     :.|.|
pombe   251 NRNVE-------ILKEEKNDLESKLYRFEEYRDKVATLELENEKIQTELNSWKSL-----ITNEL 303

  Fly   358 VSPMALRSRIEQL------LKEDIIHVAEKTSSASDTKHLNTTIRDLEHKCAIYLKNIEDLNIGL 416
            .:|.|:.:::..|      |.|.:..:..:.|:....:.|....:|..|        |.:|...|
pombe   304 PTPEAVSNKLVFLQNTNANLGERVSSLESQLSNKPANQPLGANEKDAAH--------ITELETKL 360

  Fly   417 KRHKNFKERLQRKLITVSKERDFYKQLVENFDKDTTLSNASVADMTQDMQVRVRMEVLERTVTGY 481
            |.......||||:....::|.|..::.::::|.:    .|.:::...||:...|:|.|.:.|..|
pombe   361 KELHEQNRRLQRQKSLATQEIDLLRENLKSYDDE----EAILSEKNTDMKKLERIEGLVKLVDEY 421

  Fly   482 K----DMCATLE----REIQSLRQQELVNEPAGEGYDSVKKELDTLRMENDRLRRRKEELEMEMM 538
            |    .|..:|:    .:..||:::...||....||.:     :..|.....|.:.||:..:|..
pombe   422 KLKLESMPVSLDVDETSDEVSLQKRRRKNEHKDAGYVT-----ELYRKNQHLLFQVKEKTNIEAF 481

  Fly   539 HR-----------CLRGDF----NMKDFKVVHFSENPAAEAYESTKNMMEKLQAEIERLKRRNKK 588
            .|           .||.:.    .:...:|:....||..: ||..|      .|::|.|...|..
pombe   482 LREQIITLESSIATLRQELAQVTEINSCRVLQHRSNPTLK-YERIK------AAQLEMLNAENSA 539

  Fly   589 LEDDNEQRLNETTSTGGMTLNFKEFNQLQAELESANGKMRKMRDCFKAAREEFRDVCYMLLGYRI 653
            |:...|.:..:........:..::...|:.|:.....:::::::.|.....|||:..:.|.||::
pombe   540 LKALLEDKKVDCLPIQSFKIAERKALDLKKEVAEREKRIQRLKEIFSVKSLEFREAVFSLFGYKL 604

  Fly   654 DRIGANSNYRISSMFAEGPDDYLDISLNESNCLALLESPYSHTFNPPI----DQQLAASNFPAFF 714
            |.: .|.:.|::|.::. .|:...|...||:.:.|:.:|....|...|    |::   ...|...
pombe   605 DFM-PNGSVRVTSTYSR-EDNTAFIFDGESSTMKLVGNPSGPEFERLIRFWCDER---KTIPGML 664

  Fly   715 SALTLELFQK 724
            :||||||..|
pombe   665 AALTLELLDK 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mad1NP_610477.2 MAD 80..726 CDD:461677 150/687 (22%)
mad1NP_595516.2 MAD 41..676 CDD:461677 155/710 (22%)

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