DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mad1 and Mad1

DIOPT Version :10

Sequence 1:NP_610477.2 Gene:Mad1 / 35954 FlyBaseID:FBgn0026326 Length:730 Species:Drosophila melanogaster
Sequence 2:XP_316663.5 Gene:Mad1 / 1277219 VectorBaseID:AGAMI1_013396 Length:757 Species:Anopheles gambiae


Alignment Length:739 Identity:243/739 - (32%)
Similarity:421/739 - (56%) Gaps:35/739 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SITHSAPKKLLFNRLSASFDLGVSPNKRRRERESPER-------------SLNDTASSLNMPAND 69
            |.|.....:|.|.. ||||:|  |..|||......:|             |.:.||:........
Mosquito    21 SSTAIGSSRLSFEN-SASFEL--SRKKRRISGPGCDRTTDTMYEANVSGDSFSTTATGYTTTTQV 82

  Fly    70 SMASLQNSKLRTELIETKAIVIQLRNEIEKKSREHKEAILLAENKSTALKDQCDITSKKNLELQD 134
            :.:..::.:::.:|||.::.:..|:.|||..:.|.....|..::|.::|:.:...:.:|..:|:.
Mosquito    83 AQSPWESRRIKADLIEARSRITFLKKEIEHLNTEMATTQLRNQHKISSLEKELGFSGQKVTDLEK 147

  Fly   135 DLKALRKRELVLKNEASRATAELNQLRLKFDESTLKLQK--EKYLQKEDARDVHLCINNELSEYR 197
            .|:.:||||.|.|.:.::...:|.||:.:.|....:|::  ::..||.|:....|  |.|:.:. 
Mosquito   148 HLQLVRKREHVAKQDLNKVRTQLQQLKTEADGRQFELRQALQRLEQKYDSDTGEL--NTEIRDL- 209

  Fly   198 RIAQRADLELQST--RNELERLRQLNEELQARASGFEQLRANHEKQTQSLKVANDRIQELEFEIQ 260
             ..|..|||.|.|  ::||:..|::|:.||::|..::|.:...|.....|..|..|::.||:|:.
Mosquito   210 -TTQVNDLEQQLTLAQDELDTTREINDTLQSKADAYDQTKRELEATQDRLAEAESRVKTLEYEVG 273

  Fly   261 SYSDWKEVVKTSRERLASVPDLLAEVEHLRSHNKHLNTLIGDKLLLEEQVYDYKTRLEREEGARA 325
            ||.|||.:.|.|.:|||:..::..|...|:...|:|.:||||||||||||...:.||:..|...|
Mosquito   274 SYEDWKSLSKVSADRLANTTEIEKENVRLKDQLKNLQSLIGDKLLLEEQVASSQARLKDLEQKDA 338

  Fly   326 EAASLQVKLLHMEQELKEWVKVAQDHCLANTLVSPMALRSRIEQLLKEDIIHVAEKTSSASDTKH 390
            .:|:|:|::..:|:||.||.::.:|:....:|||...:|:||||:|::|::...|::|..::...
Mosquito   339 LSAALEVRVKELERELVEWRQLGKDYTPKESLVSAKTMRNRIEQILQKDLVLANEQSSVQTEKHQ 403

  Fly   391 LNTTIRDLEHKCAIYLKNIEDLNIGLKRHKNFKERLQRKLITVSKERDFYKQLVENFDKDTTLSN 455
            :...|.:|:.:.|:....:.|.....:..::...|.|:||..|:.|||:.|||:|:::.|.|:|:
Mosquito   404 IQGRIEELQSENALLNGRLADYKRAQEGLQSIVHRAQKKLNLVTGERDYLKQLLESYENDLTISH 468

  Fly   456 ASVADMTQDMQVRVRMEVLERTVTGYKDMCATLEREIQSLR-QQELVNEPAGEGYDSVKKELDTL 519
            :.|.......|:|.|:|:||:|:|||||:|...|.::|:.: ..::......|.|:.::||:|.|
Mosquito   469 SVVGSEADKKQLRARIEMLEKTLTGYKDLCQKQEADLQANKVLPDISFVLTSEQYEKLRKEIDEL 533

  Fly   520 RMENDRLRRRKEELEMEMMHRCLRGDFN----MKDFKVVHFSENPAAEAYESTKNMMEKLQAEIE 580
            |:||:||:|||:|||:|:.:|.||...|    .:..|:|.:..:||.|...:..|...||.||||
Mosquito   534 RLENERLKRRKDELEVEVENRTLRAQINRPCPTQTTKLVRYINSPATEDIVAEHNTKLKLMAEIE 598

  Fly   581 RLKRRNKKLEDDNE---QRLNETTSTGGMTLNFKEFNQLQAELESANGKMRKMRDCFKAAREEFR 642
            |||...::|::.|:   :.|:.|..||.||:..||...|:.:|:....|..:.::.::.:.|:||
Mosquito   599 RLKLHIQRLQETNQDLTECLHNTDETGNMTMKIKESVDLRMQLKELQAKYDQRKELYQQSSEDFR 663

  Fly   643 DVCYMLLGYRIDRIGANSNYRISSMFAEGPDDYLDISL-NESNCLALLESPYSHTFNPPIDQQLA 706
            .|..:|.|::|||| :.|.:::.|.:||.||:||:.:| .:.:.|.||||.|:.:....::.|..
Mosquito   664 TVVNLLFGFKIDRI-SGSYFQLRSQYAESPDEYLNFALAPDGSVLTLLESDYAASLRDLVETQFK 727

  Fly   707 ASN-FPAFFSALTLELFQKATVTM 729
            ..| .|.|.|:||||||.:.|:|:
Mosquito   728 THNSVPVFLSSLTLELFNRTTMTV 751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mad1NP_610477.2 MAD 80..726 CDD:461677 224/659 (34%)
Mad1XP_316663.5 None

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