DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkn and PRKCE

DIOPT Version :9

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_005391.1 Gene:PRKCE / 5581 HGNCID:9401 Length:737 Species:Homo sapiens


Alignment Length:414 Identity:179/414 - (43%)
Similarity:261/414 - (63%) Gaps:33/414 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1112 AKAAAAASVYSPS------SSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPP------ 1164
            |::...||..|||      |:.||..:|:.::...|:.:.|.:...|  |..||...|.      
Human   327 AESPQPASGSSPSEEDRSKSAPTSPCDQEIKELENNIRKALSFDNRG--EEHRAASSPDGQLMSP 389

  Fly  1165 ---------NAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLL 1220
                     .|..|.:|.|..:.|||:|.||||:|::|:..::.||:|.|||..|:..|:|:..:
Human   390 GENGEVRQGQAKRLGLDEFNFIKVLGKGSFGKVMLAELKGKDEVYAVKVLKKDVILQDDDVDCTM 454

  Fly  1221 SEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHI-HTDVFLEPRAVFYAACVV 1284
            :||||  :|.|.:||:|..||.||||:..:.|||||..|||||..| .:..|.|||:.||||.|.
Human   455 TEKRI--LALARKHPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVT 517

  Fly  1285 LGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTET 1349
            ..|.:||::.:|||||||||:|||.||:.|:||||:||||:..|..|.||||||:::|||:|.|.
Human   518 SALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQEL 582

  Fly  1350 SYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPE 1414
            .|..:||||.||||::||:.|:.||..|:|:::|:||::|:|.||.:||.||:::::..:.|||.
Human   583 EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPH 647

  Fly  1415 RRLG--SSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTPP 1477
            :|||  :|:...:.:|:..||:.|.|..|..:|:||||.|.|....||:|||::||.|:..||..
Human   648 KRLGCVASQNGEDAIKQHPFFKEIDWVLLEQKKIKPPFKPRIKTKRDVNNFDQDFTREEPVLTLV 712

  Fly  1478 KEP--RHLTEEEQLLFQDFSYTAE 1499
            .|.  :.:.:||   |:.|||..|
Human   713 DEAIVKQINQEE---FKGFSYFGE 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:301316
STKc_PKN 1174..1499 CDD:270741 158/329 (48%)
S_TKc 1174..1433 CDD:214567 129/261 (49%)
PRKCENP_005391.1 C2_PKC_epsilon 3..135 CDD:175981
C1_nPKC_epsilon-like_rpt1 161..224 CDD:410385
Interaction with actin. /evidence=ECO:0000250 223..228
C1_nPKC_epsilon-like_rpt2 241..295 CDD:410388
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..356 10/28 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 370..398 5/29 (17%)
STKc_nPKC_epsilon 412..732 CDD:270743 157/324 (48%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149257
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0694
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.770

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