DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and prkcq

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_009298659.1 Gene:prkcq / 555521 ZFINID:ZDB-GENE-041210-195 Length:719 Species:Danio rerio


Alignment Length:328 Identity:156/328 - (47%)
Similarity:227/328 - (69%) Gaps:8/328 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1170 SMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRH 1234
            ::|:|.|..:||:|.||||.|::|:.:.|::|:|||||..::..|:||..:.|:|:..:  |..|
Zfish   388 TIDSFILHKMLGKGSFGKVFLAELKGSGQFFAVKALKKDVVLMDDDVECTMVERRVLSL--AWDH 450

  Fly  1235 PFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIHT-DVFLEPRAVFYAACVVLGLQYLHENKIIYR 1298
            |||.:||..|||::::.|||||..|||||.||.| ..|..||:.||||.::.|||:||...|:||
Zfish   451 PFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQTCHRFDLPRSTFYAAEIICGLQFLHSKGIVYR 515

  Fly  1299 DLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVL 1363
            ||||||:||||:|::||||||:|||.:....||.||||||:::|||:|....|..:||||..|||
Zfish   516 DLKLDNILLDTDGHIKIADFGMCKENIIGEARTCTFCGTPDYIAPEILLGQKYGTSVDWWSFGVL 580

  Fly  1364 IFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVK 1428
            ::|||:|:|||.|.||||:|.||..|:..|||:|:.:|..::.:|..:.||||||..    .:::
Zfish   581 LYEMLIGQSPFHGHDEEELFQSIRTDDPCYPRWLTRDARDILVKLFVREPERRLGVK----GNIR 641

  Fly  1429 KQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTPPKEPRHLTEEEQLLFQD 1493
            :..|||...|..|..|:|:|||.||:....|.||||:||.:||.:|: ..:...:...:|.:|::
Zfish   642 QHPFFRETDWSALEERQVEPPFKPTVKSANDCSNFDKEFINEKPRLS-VTDRMMINSMDQSMFEN 705

  Fly  1494 FSY 1496
            ||:
Zfish   706 FSF 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 155/324 (48%)
prkcqXP_009298659.1 C1_nPKC_theta-like_rpt1 159..219 CDD:410384
C1_nPKC_theta-like_rpt2 238..287 CDD:410387
STKc_nPKC_theta 386..716 CDD:270770 156/328 (48%)
Blue background indicates that the domain is not in the aligned region.

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