DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and Pka-C2

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_733397.2 Gene:Pka-C2 / 43644 FlyBaseID:FBgn0000274 Length:354 Species:Drosophila melanogaster


Alignment Length:348 Identity:119/348 - (34%)
Similarity:192/348 - (55%) Gaps:20/348 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1124 SSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGKV 1188
            :|....||.:.......|::|  ::.|....:|     |.|   ..:::|:...:|||.|.||.|
  Fly     5 TSQYVFNSKEDYNVILDNMSR--EFEERWNHQT-----QSP---YTNLENYITRAVLGNGSFGTV 59

  Fly  1189 ILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFV 1253
            :|.:.:|...|||.|.:.|.|::...:|..:.:||   .|.||.|.|||:.|....:...::..:
  Fly    60 MLVREKSGKNYYAAKMMSKEDLVRLKQVAHVHNEK---HVLNAARFPFLIYLVDSTKCFDYLYLI 121

  Fly  1254 MEYAAGGDLM-MHIHTDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIAD 1317
            :....||:|. .|.....|.|..|.||||.|.|.|:|:|:..::|||||.:|:|||..||:||.|
  Fly   122 LPLVNGGELFSYHRRVRKFNEKHARFYAAQVALALEYMHKMHLMYRDLKPENILLDQRGYIKITD 186

  Fly  1318 FGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEV 1382
            ||..|...|   ||.|.|||||:||||::....|.::||||..|:|::|.:.|.|||...:.:.:
  Fly   187 FGFTKRVDG---RTSTLCGTPEYLAPEIVQLRPYNKSVDWWAFGILVYEFVAGRSPFAIHNRDVI 248

  Fly  1383 --FDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRK 1445
              :..|...:.:.|.:.:.:..:::..|::.:..:|||:|...:.|||...:|:.:.|..:|.::
  Fly   249 LMYSKICICDYKMPSYFTSQLRSLVESLMQVDTSKRLGNSNDGSSDVKSHPWFQGVDWFGILNQE 313

  Fly  1446 VKPPFVPTINHLEDVSNFDE-EF 1467
            |..|:.|||:..||:|||:. ||
  Fly   314 VTAPYQPTISGAEDLSNFENFEF 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 109/298 (37%)
Pka-C2NP_733397.2 Protein Kinases, catalytic domain 43..334 CDD:473864 108/296 (36%)
Blue background indicates that the domain is not in the aligned region.

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