DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and Pkc98E

DIOPT Version :9

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_001287577.1 Gene:Pkc98E / 43428 FlyBaseID:FBgn0003093 Length:739 Species:Drosophila melanogaster


Alignment Length:487 Identity:193/487 - (39%)
Similarity:276/487 - (56%) Gaps:51/487 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1019 ENLGTRLHS------SHSSSAGDRFCVEVIPQLGKLYVGSSQQQYAQQSSPIIQEPATPTIYGNS 1077
            |..|..:|.      :::.....:...|::..||   :...:||  .:.|..:.:......||.|
  Fly   283 ETCGMNVHKRCQKNVANTCGINTKQMAEILSSLG---ISPDKQQ--PRRSKYLNQQGGEDNYGAS 342

  Fly  1078 AAAGAPQFPQPAQRQEKQPPQQQPIYANQYELNVAKAAAAASVYSPSSSTTSNSNQQQQQQRRNV 1142
            ..|.....|..:.|                       :.|.||.|.::|||:.::......    
  Fly   343 LGADGDGAPGQSFR-----------------------SCALSVDSLATSTTTMTSGYNSSS---- 380

  Fly  1143 ARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKK 1207
            ...|....|||:  |..|:..|  |..|:.:|..:.|||:|.||||:|::.:..::.||||.|||
  Fly   381 CMSLAVTGSGGV--GATGETRP--GKCSLLDFNFIKVLGKGSFGKVMLAEKKGTDEIYAIKVLKK 441

  Fly  1208 GDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH-TDVF 1271
            ..||..|:|:..::||||  :|.|..||||..|:|||||...:.|||||..|||||..|. ...|
  Fly   442 DAIIQDDDVDCTMTEKRI--LALAANHPFLTALHSCFQTPDRLFFVMEYVNGGDLMFQIQKARRF 504

  Fly  1272 LEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCG 1336
            ...||.||||.|.|.||:||.:.:|||||||||:|||.||:.|:||||:||||:..|..|.||||
  Fly   505 EASRAAFYAAEVTLALQFLHTHGVIYRDLKLDNILLDQEGHCKLADFGMCKEGIMNGMLTTTFCG 569

  Fly  1337 TPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEA 1401
            ||:::|||:|.|..|..:||||.||||::||:.|:.||..|:|:|:||||::|:|.||.:||.||
  Fly   570 TPDYIAPEILKEQEYGASVDWWALGVLMYEMMAGQPPFEADNEDELFDSIMHDDVLYPVWLSREA 634

  Fly  1402 IAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEE 1466
            :::::..|.||||:|||.: .|..:::|..||..:.|.:|..|.:||||.|.:.:..|.:|||.|
  Fly   635 VSILKGFLTKNPEQRLGCT-GDENEIRKHPFFAKLDWKELEKRNIKPPFRPKMKNPRDANNFDAE 698

  Fly  1467 FTSEKAQLTP--PKEPRHLTEEEQLLFQDFSY 1496
            ||.|...|||  .:..|.:.::|   |..||:
  Fly   699 FTKEDPVLTPIGNEVVRCINQDE---FAGFSF 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:301316
STKc_PKN 1174..1499 CDD:270741 162/326 (50%)
S_TKc 1174..1433 CDD:214567 136/259 (53%)
Pkc98ENP_001287577.1 C2_PKC_epsilon 1..134 CDD:175981
C1_1 177..228 CDD:278556
C1_1 252..304 CDD:278556 3/20 (15%)
STKc_nPKC_epsilon 412..729 CDD:270743 161/322 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452328
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0694
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D27201at7147
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24356
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
65.880

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