DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and Pka-C1

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_476977.1 Gene:Pka-C1 / 34284 FlyBaseID:FBgn0000273 Length:353 Species:Drosophila melanogaster


Alignment Length:359 Identity:128/359 - (35%)
Similarity:198/359 - (55%) Gaps:46/359 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1124 SSSTTSNSN-----------QQQQQQ-----RRNVARGLQYRESGGLETGRAGKQPPNAGMLSMD 1172
            :::||||..           :|.:::     |||                     |.|..  ::|
  Fly     3 NNATTSNKKVDAAETVKEFLEQAKEEFEDKWRRN---------------------PTNTA--ALD 44

  Fly  1173 NFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFL 1237
            :|..:..||.|.||:|::.|.:....|||:|.|.|..::...:||..|:||||.:   |::.|||
  Fly    45 DFERIKTLGTGSFGRVMIVQHKPTKDYYAMKILDKQKVVKLKQVEHTLNEKRILQ---AIQFPFL 106

  Fly  1238 VNLYSCFQTEQHVCFVMEYAAGGDLMMHIH-TDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLK 1301
            |:|...|:...::..|:||..||::..|:. ...|.||.:.||||.:||..:|||...:||||||
  Fly   107 VSLRYHFKDNSNLYMVLEYVPGGEMFSHLRKVGRFSEPHSRFYAAQIVLAFEYLHYLDLIYRDLK 171

  Fly  1302 LDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFE 1366
            .:|||:|::||:|:.|||..|...|   ||.|.|||||:||||::....|.:|||||.||||::|
  Fly   172 PENLLIDSQGYLKVTDFGFAKRVKG---RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLVYE 233

  Fly  1367 MLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQA 1431
            |..|..||..|...::::.||:.:||:|.....:...::|.||:.:..:|.|:.:....|:|.|.
  Fly   234 MAAGYPPFFADQPIQIYEKIVSGKVRFPSHFGSDLKDLLRNLLQVDLTKRYGNLKAGVNDIKNQK 298

  Fly  1432 FFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDE 1465
            :|.|..|..:..:|::.||:|......|.||||:
  Fly   299 WFASTDWIAIFQKKIEAPFIPRCKGPGDTSNFDD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 117/293 (40%)
Pka-C1NP_476977.1 STKc_PKA 44..333 CDD:271111 118/295 (40%)
Blue background indicates that the domain is not in the aligned region.

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