DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and prkcda

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_999873.1 Gene:prkcda / 334571 ZFINID:ZDB-GENE-030131-6503 Length:684 Species:Danio rerio


Alignment Length:410 Identity:174/410 - (42%)
Similarity:251/410 - (61%) Gaps:31/410 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly  1104 ANQYELNVAKAAAAASVYSPSSSTTSNSNQQQ---------QQQRRNVARGLQYRESGGLETGRA 1159
            ||...:|....|.|.:..|..|||....|..|         :....:|..|..|   |.:..|.:
Zfish   278 ANLCGINQKLLAEALTQVSTKSSTKRPDNNTQDVGVYQDFNKSPGPDVTDGTPY---GHIWEGSS 339

  Fly  1160 GKQP---PNAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLS 1221
            .:.|   .:...::.::|....|||:|.||||:|::|:...:::|:|||||..::..|:||..:.
Zfish   340 PRPPSRITHQTRITAEHFIFHKVLGKGSFGKVLLAELKGTGEWFAVKALKKDVVLMDDDVECTMV 404

  Fly  1222 EKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIHT----DVFLEPRAVFYAAC 1282
            |||:  :|.|..:|||.:|||.|||::|:.|||||..|||||.||..    |::   ||.||||.
Zfish   405 EKRV--LALAWDNPFLTHLYSTFQTKEHLFFVMEYLNGGDLMFHIQEKGRFDLY---RATFYAAE 464

  Fly  1283 VVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGD-RTGTFCGTPEFLAPEVL 1346
            :|.|||:||...||||||||||::||.:|::||||||:|||.: ||| |..||||||:::|||:|
Zfish   465 IVCGLQFLHSKGIIYRDLKLDNVMLDGDGHIKIADFGMCKENV-FGDNRATTFCGTPDYIAPEIL 528

  Fly  1347 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRK 1411
            ....|:.:||||..|||::|||:|:|||.||||:|:|:||..|...|||::.|:...::.||..:
Zfish   529 LGQQYSFSVDWWSFGVLVYEMLIGQSPFHGDDEDELFESIRMDTPHYPRWILLDTRDMLERLFER 593

  Fly  1412 NPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTP 1476
            :|.||||.    ..:::..:||:::.|..|..|:|.|||.|.:....|.||||.||.|||.:|: 
Zfish   594 DPSRRLGI----VGNIRGHSFFKTVNWAALEGREVDPPFKPKVKAPNDCSNFDREFLSEKPRLS- 653

  Fly  1477 PKEPRHLTEEEQLLFQDFSY 1496
            ..|...:...:|..|..||:
Zfish   654 HCEKGLIDSMDQCAFAGFSF 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 157/328 (48%)
prkcdaNP_999873.1 C1_nPKC_theta-like_rpt1 153..213 CDD:410384
C1_nPKC_theta-like_rpt2 232..281 CDD:410387 2/2 (100%)
STKc_nPKC_delta 361..676 CDD:173710 156/324 (48%)
Blue background indicates that the domain is not in the aligned region.

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