DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and S6kII

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_523437.2 Gene:S6kII / 33139 FlyBaseID:FBgn0262866 Length:911 Species:Drosophila melanogaster


Alignment Length:611 Identity:175/611 - (28%)
Similarity:270/611 - (44%) Gaps:130/611 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   924 PLASNQIMPSLNARPCQSQSPNHNEFQLQPQPPHPAQKPTNPEPPSAVEQQLHRPVLILPPVVLL 988
            |||.:|                 .:.:.|||.....|..::....:..|||.....        |
  Fly     2 PLADSQ-----------------KDLRQQPQQQQQQQHVSSTSSSNNAEQQCSSSG--------L 41

  Fly   989 GGREEDR---------SVPPSPLVEYPEDDDEYLYRGSNENLGTRLHSSHSSSAGDRFCVEVIPQ 1044
            |.:...|         |:..:|:...|.:|||  ..|.|..:.:.:.:..||....        |
  Fly    42 GLQLRQRMQITSSGCSSLAVTPMEHTPTEDDE--SGGGNSGVTSSVTTVTSSQRRQ--------Q 96

  Fly  1045 LGKLYVGSSQQQYAQQSSPIIQEPATPTIYGNSAAAGAPQFPQPAQRQEKQPPQQQPIYANQYEL 1109
            |.::     |||.|.|:: :.|...:||...:||.      .:|..|....||:...:       
  Fly    97 LQQV-----QQQSALQAA-LEQHHISPTADLDSAR------KRPTHRTLCPPPELMEL------- 142

  Fly  1110 NVAKAAAAASVYSPSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPN----AGMLS 1170
                               |:|..|         .|:   |:||...|..|:..|:    ..:..
  Fly   143 -------------------SDSESQ---------GGV---ETGGRREGATGRSAPDLEDTEPLYE 176

  Fly  1171 MDN-------------------FRLLSVLGRGHFGKVILSQL---RSNNQYYAIKALKKGDIIAR 1213
            .:|                   |.||.|||.|.||||.|.:.   :.....||:|.|||..:..:
  Fly   177 TENEFELKEVIKEGHDKADPSQFELLRVLGEGSFGKVFLVRKIIGKDAGTLYAMKVLKKATLKVK 241

  Fly  1214 DEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIHTDV-FLEPRAV 1277
            |.|.|....|.:.:|.    |.|:|.|:..|||...:..::::..||||...:..:| |.|....
  Fly   242 DRVRSTNERKILADVG----HAFIVRLHYAFQTPGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 302

  Fly  1278 FYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLA 1342
            ||.|.:.|.:.:||...|||||||.:|:|||..|::.:.||||.|:.:. |.:|.:||||.|::|
  Fly   303 FYLAELALAMNHLHTLGIIYRDLKPENILLDEHGHIALTDFGLSKQPLD-GSKTYSFCGTVEYMA 366

  Fly  1343 PEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRR 1407
            ||::....:..|.|||..|||::|||.|..||.|...:|..:.|:..::..|..||.||.:::|.
  Fly   367 PEIVNRKGHDFAADWWSFGVLMYEMLTGNLPFHGQTRQETMNQILRSKLGMPENLSPEAQSLLRA 431

  Fly  1408 LLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKA 1472
            |.::||:.|||:..:...|:|...||.:|.|..|..::|:|||:|.::. :|...||.|:|| |:
  Fly   432 LFKRNPQNRLGAGAQGILDIKAHCFFATIDWVRLERKQVRPPFIPAVSR-DDAFYFDVEYTS-KS 494

  Fly  1473 QLTPPKEPRHLTEEEQLLFQDFSYTA 1498
            ....|..|...:..|  :|:.||:.|
  Fly   495 PRDSPGGPISASAHE--IFRGFSFVA 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 124/329 (38%)
S6kIINP_523437.2 STKc_RSK_N 203..517 CDD:270734 120/322 (37%)
STKc_RSK_C 567..883 CDD:270993
Blue background indicates that the domain is not in the aligned region.

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