DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and Prkcg

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_036760.1 Gene:Prkcg / 24681 RGDID:3397 Length:697 Species:Rattus norvegicus


Alignment Length:396 Identity:166/396 - (41%)
Similarity:225/396 - (56%) Gaps:38/396 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly  1107 YELNVAKAAAAASVYSPSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSM 1171
            || .|....:::.:.|||.|.|.:.                 |...|...||          |.:
  Rat   312 YE-RVRMGPSSSPIPSPSPSPTDSK-----------------RCFFGASPGR----------LHI 348

  Fly  1172 DNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHP- 1235
            .:|..|.|||:|.||||:|::.|.:::.||||.|||..|:..|:|:..|.|||:..:..  |.| 
  Rat   349 SDFSFLMVLGKGSFGKVMLAERRGSDELYAIKILKKDVIVQDDDVDCTLVEKRVLALGG--RGPG 411

  Fly  1236 ----FLVNLYSCFQTEQHVCFVMEYAAGGDLMMHI-HTDVFLEPRAVFYAACVVLGLQYLHENKI 1295
                ||..|:|.|||...:.|||||..|||||.|| ....|.||.|.||||.:.:||.:||...|
  Rat   412 GRPHFLTQLHSTFQTPDRLYFVMEYVTGGDLMYHIQQLGKFKEPHAAFYAAEIAIGLFFLHNQGI 476

  Fly  1296 IYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGL 1360
            |||||||||::||.||::||.|||:|||.:..|..|.||||||:::|||::....|.::||||..
  Rat   477 IYRDLKLDNVMLDAEGHIKITDFGMCKENVFPGSTTRTFCGTPDYIAPEIIAYQPYGKSVDWWSF 541

  Fly  1361 GVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAE 1425
            |||::|||.|:.||.|:||||:|.:|:...|.||:.||.||:|:.:..|.|:|.:||||......
  Rat   542 GVLLYEMLAGQPPFDGEDEEELFQAIMEQTVTYPKSLSREAVAICKGFLTKHPGKRLGSGPDGEP 606

  Fly  1426 DVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTPPKEPRHLTEEEQLL 1490
            .::...|||.|.|:.|...::.|||.|.... ....|||:.||.....|||| :...|...:|..
  Rat   607 TIRAHGFFRWIDWERLERLEIAPPFRPRPCG-RSGENFDKFFTRAAPALTPP-DRLVLASIDQAD 669

  Fly  1491 FQDFSY 1496
            ||.|:|
  Rat   670 FQGFTY 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 153/329 (47%)
PrkcgNP_036760.1 C1_cPKC_rpt1 34..91 CDD:410383
C1_cPKC_rpt2 101..154 CDD:410386
C2_PKC_alpha_gamma 158..289 CDD:175992
STKc_cPKC 354..677 CDD:270739 152/326 (47%)
Blue background indicates that the domain is not in the aligned region.

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