DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkn and Prkcb

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:NP_032881.1 Gene:Prkcb / 18751 MGIID:97596 Length:673 Species:Mus musculus


Alignment Length:377 Identity:160/377 - (42%)
Similarity:233/377 - (61%) Gaps:9/377 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1123 PSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGK 1187
            |...:..|...:|:.:|..:.:|.:..|.....|........|...:.:.:|..|.|||:|.|||
Mouse   291 PPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGK 355

  Fly  1188 VILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCF 1252
            |:||:.:..::.||:|.|||..:|..|:||..:.|||:..:..  :.|||..|:|||||...:.|
Mouse   356 VMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG--KPPFLTQLHSCFQTMDRLYF 418

  Fly  1253 VMEYAAGGDLMMHI-HTDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIA 1316
            ||||..|||||.|| ....|.||.||||||.:.:||.:|....||||||||||::||:||::|||
Mouse   419 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA 483

  Fly  1317 DFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEE 1381
            |||:|||.:..|..|.||||||:::|||::....|.::||||..|||::|||.|::||.|:||:|
Mouse   484 DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 548

  Fly  1382 VFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWDDLLLRKV 1446
            :|.||:...|.||:.:|.||:|:.:.|:.|:|.:|||.......|:|:.||||.|.|:.|..:::
Mouse   549 LFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEI 613

  Fly  1447 KPPFVPTINHLEDVSNFDEEFTSEKAQLTPPKEP--RHLTEEEQLLFQDFSY 1496
            :||:.|.... .:..|||..||.....||||.:.  |::.:.|   |:.||:
Mouse   614 QPPYKPKACG-RNAENFDRFFTRHPPVLTPPDQEVIRNIDQSE---FEGFSF 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 152/326 (47%)
PrkcbNP_032881.1 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992
STKc_cPKC_beta 341..663 CDD:270767 152/327 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.