DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkn and pkn1

DIOPT Version :9

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_004918939.1 Gene:pkn1 / 100379847 XenbaseID:XB-GENE-5859255 Length:953 Species:Xenopus tropicalis


Alignment Length:1490 Identity:495/1490 - (33%)
Similarity:647/1490 - (43%) Gaps:570/1490 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EGFIARRKCHSLPRRSNRHSTARRSNSGLWNRLVTNVFGPEDSYDFDNEGDS-----GGAVFYTD 89
            :|.:....|.....|.......|.:.||  :|....|.....|...:.:.||     |.::..|:
 Frog    12 DGEVQVNNCTPCILREESRGERREAQSG--DRQPGEVQETCPSDGMETQRDSKKVKQGDSLEETE 74

  Fly    90 SVNGSNYEISAEGEYIKHPVLYELSHKYGFTENLPESCMSIRLEEIKEAIRREIRKELKIKEGAE 154
            .:...:.: ..||         |....:||             |..::.:|:||.:|||||||||
 Frog    75 GLERGDQQ-GMEG---------ERGETHGF-------------EGERDRLRKEISRELKIKEGAE 116

  Fly   155 KLREVAKDRRSLSDVAVLVKKSKSKLAELKSELQELESQILLTSANTAVNSNGQESITACIDPNG 219
            |||....:|::|..|..:::..:.:|..||.||.:||     |:..:.|::..        ||:.
 Frog   117 KLRRATTERKNLGHVETMLRTCEKRLESLKQELDDLE-----TTPTSPVSTGA--------DPHS 168

  Fly   220 -GFLVSGAVGGLGGGNTALEGGAPATANDKVLASLEKQLQIEMKVKTGAENMIQ--SLGIGCDKK 281
             |....|                   ...|:| .||:||.||::::.|||||:|  |.|...|||
 Frog   169 PGLRTDG-------------------QRSKIL-GLERQLDIELRMRKGAENMLQMYSQGGAKDKK 213

  Fly   282 LLAEAHQMLADSKAKIEFLRLRIIKVKQNREQADRLKASRQMIDEHGQTIGGNNSSQPQSLETTL 346
            |.:..||||::|..||.|||.:|.|..|:                   |.|....    :||...
 Frog   214 LHSATHQMLSESDIKIRFLRAQIYKESQD-------------------TSGAGEG----ALEVLH 255

  Fly   347 EE-RIEELRHRLRIEAAVVDGAKNVIRTLQTANRAPDKKALQEAHGRLSESSRKLDLLRYSLDLR 410
            .| ||||.||..|:|.||.:||:|.:|.|..| |..|:.|:.|...||.||.::.|||..||...
 Frog   256 NELRIEEARHHYRVERAVAEGAENALRMLGAA-RTQDRSAINEVQARLLESQQRTDLLALSLQRC 319

  Fly   411 RQELPADSPAAQQLKTELQIVQLSTSPAPVTYTSLQSGQAGILGGKPYQSVSSLGRCASVTGKLE 475
            ..|||.|.|....|:.||   .|.:||:.:..:||.:         ||.|||   :.|.:||.||
 Frog   320 LDELPHDHPKRCILREEL---ALHSSPSRLDASSLLT---------PYSSVS---KPAPLTGVLE 369

  Fly   476 VRLLGCQDLLEDVPGRSRRDK---DNNSSPGDLRSFVKGVTSR--------SSSKSYSVKDETSI 529
            |.::.|..:|:.||||:|...   .||.||      ::|:..|        |.:.|.|..:|.|.
 Frog   370 VCIVDCTKILDMVPGRTRASPTRLPNNVSP------LEGLAMRTRTGRNMYSRTASLSRSEELSD 428

  Fly   530 EIMAVIKLDNITVGQTSWKQCSQQAWDQRFSIDLDRSRELEIGVYWRDWRSLCAVKVLRLEEFID 594
            ||..|::|||..||||:||...:..|||.|.:.|:|:|||::.||.||:|||||:|.|:||:|:|
 Frog   429 EISVVLRLDNNVVGQTAWKSEGRDTWDQIFKLKLERARELQLSVYRRDYRSLCAIKYLKLEDFLD 493

  Fly   595 DVRHGMALQLEPQGLLFAEVKFLNPMISQKPKLRRQRMIFNRQQAKNISRAKQMNINVATWGRLL 659
            ..:|...|:|||||.|..||.|.||:|.:...||||:.||:::|.:...||:||||:..||.|||
 Frog   494 HQKHETYLELEPQGTLLCEVAFYNPVIERFSNLRRQKKIFSKEQGRAFLRARQMNIDPLTWLRLL 558

  Fly   660 KRNAPNHVHMGSAGSGSSLTGSSPMVVGGSRDSESPISRTPSSDALVEPEPYTPGEQAQNLEFDP 724
            :|.                ..:|.:|                         |:||::        
 Frog   559 RRG----------------VNTSSVV-------------------------YSPGDR-------- 574

  Fly   725 DAGINEHVETPGEYPDPAASGLSGMRPLSMHMQGISVLPPESPPVATGAAGRPNTLSLQMPGASK 789
                                                                         ||  
 Frog   575 -------------------------------------------------------------GA-- 576

  Fly   790 GQVIQGGRTAAPTTAPPPPPVLKATSTTPILDQELQDALHEFDFLSDLDSRPTTLRRLLKEQKMA 854
                                             |||                             
 Frog   577 ---------------------------------ELQ----------------------------- 579

  Fly   855 LDAGALENLLLQQQQTEQQALQQRQRQEQLRLQQFQEAQRQAILDLCVKQREPAEQTSPTLANQT 919
                 ||:|.|             :.:|:::                                  
 Frog   580 -----LESLTL-------------ETKEEIK---------------------------------- 592

  Fly   920 PTFPPLASNQIMPSLNARPCQSQSPNHNEFQLQPQPPHPAQKPTNPEPPSAVEQQLHRPVLILPP 984
                                                                             
 Frog   593 ----------------------------------------------------------------- 592

  Fly   985 VVLLGGREEDRSVPPSPLVEYPEDDDEYLYRGSNENLGTRLHSSHSSSAGDRFCVEVIPQLGKLY 1049
                                             ||                              
 Frog   593 ---------------------------------NE------------------------------ 594

  Fly  1050 VGSSQQQYAQQSSPIIQEPATPTIYGNSAAAGAPQFPQPAQRQEKQPPQQQPIYANQYELNVAKA 1114
                                              |.|.|   :|||.|.                
 Frog   595 ----------------------------------QVPVP---EEKQVPV---------------- 606

  Fly  1115 AAAASVYSPSSSTTSNSNQQQQQQRRNVARGLQYRESGGLETGRAGKQPPNAGMLSMDNFRLLSV 1179
                              .:::.|||.                      .:...||:||||||:|
 Frog   607 ------------------VRRESQRRT----------------------QSVSQLSLDNFRLLAV 631

  Fly  1180 LGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCF 1244
            |||||||||:||:.:...:.:|||||||||||:||||||||.|||:|...:|..||||::|..||
 Frog   632 LGRGHFGKVLLSEYKETGELFAIKALKKGDIISRDEVESLLCEKRVFVAVSAASHPFLLSLLGCF 696

  Fly  1245 QTEQHVCFVMEYAAGGDLMMHIHTDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDT 1309
            ||.:||||||:|.||||||.|||::||.:|||:||||||:||||:||...|:||||||||||||:
 Frog   697 QTAEHVCFVMDYLAGGDLMTHIHSEVFSQPRAMFYAACVLLGLQFLHSKNIVYRDLKLDNLLLDS 761

  Fly  1310 EGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPF 1374
            |||||:||:||||||||..|||.|||||||||||||||:.||||||||||.||||:||:||||||
 Frog   762 EGYVKLADYGLCKEGMGPSDRTSTFCGTPEFLAPEVLTDASYTRAVDWWGFGVLIYEMMVGESPF 826

  Fly  1375 PGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRKNPERRLGSSERDAEDVKKQAFFRSIVWD 1439
            |||:||||||||||||||||||||.|||||||||||:||||||||.||||||||||.||:.:.::
 Frog   827 PGDEEEEVFDSIVNDEVRYPRFLSAEAIAVMRRLLRRNPERRLGSGERDAEDVKKQPFFKEMDFE 891

  Fly  1440 DLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLTPPKEPRHLTEEEQLLFQDFSYTAE 1499
            .||.|::.|||.|.:....|:||||.|||.|..:||||:|||.|..|||.||..|.|..|
 Frog   892 ALLSRRLPPPFTPCVKGPHDISNFDPEFTCEGPELTPPREPRLLKPEEQELFHGFDYVRE 951

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012 26/62 (42%)
HR1_PKN_2 243..309 CDD:212013 32/67 (48%)
HR1_PKN_3 340..414 CDD:212015 32/74 (43%)
C2 530..611 CDD:301316 43/80 (54%)
STKc_PKN 1174..1499 CDD:270741 235/324 (73%)
S_TKc 1174..1433 CDD:214567 202/258 (78%)
pkn1XP_004918939.1 HR1_PKN_1 92..156 CDD:212012 29/81 (36%)
HR1_PKN_2 173..243 CDD:212013 34/108 (31%)
HR1_PKN_3 253..323 CDD:212015 30/70 (43%)
C2 429..509 CDD:387358 43/79 (54%)
STKc_PKN 626..951 CDD:270741 235/324 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10145
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D241576at33208
OrthoFinder 1 1.000 - - FOG0001458
OrthoInspector 1 1.000 - - otm48415
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X914
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.010

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