DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkn and prkceb

DIOPT Version :9

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_002664164.2 Gene:prkceb / 100332055 ZFINID:ZDB-GENE-081028-47 Length:738 Species:Danio rerio


Alignment Length:431 Identity:178/431 - (41%)
Similarity:269/431 - (62%) Gaps:37/431 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly  1090 QRQEK--QPPQQQPI-YANQYELNVAKAAAAASVYSPSSSTTSN--------SNQQQQQQRRNVA 1143
            ||::|  |.|...|: .:...|.:..|:|..    ||......:        |...:.::.:..:
Zfish   320 QRRKKISQGPDPHPLPISPLLEEDRCKSAPT----SPCDQDIKDLENIRKALSFDHRSEEMKQAS 380

  Fly  1144 RGL-----QYRESGGLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIK 1203
            .|:     :.||:|.::|.:|.:       :.:::|..:.|||:|.||||:|::||..::.:|:|
Zfish   381 EGVSEETGEARENGEVKTVQAKR-------MMLEDFSFIKVLGKGSFGKVMLAELRGTDEVFAVK 438

  Fly  1204 ALKKGDIIARDEVESLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHI-H 1267
            .|||..|:..|:|:..::||||  :|.|.:||:|..||.||||:..:.|||||..|||||..| .
Zfish   439 VLKKDVILQDDDVDCTMTEKRI--LALARKHPYLTQLYCCFQTKDRLFFVMEYVNGGDLMFQIQR 501

  Fly  1268 TDVFLEPRAVFYAACVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTG 1332
            :..|.|.|:.||||.|...|.:||.|.:|||||||||:|||.||:.|:||||:||||:..|..|.
Zfish   502 SRKFDEARSRFYAAEVTSALMFLHHNGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILDGITTT 566

  Fly  1333 TFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL 1397
            ||||||:::|||:|.|..|..:||||.||||::||:.|:.||..|:|:::|:||::|:|.||.:|
Zfish   567 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWL 631

  Fly  1398 SLEAIAVMRRLLRKNPERRLGS--SERDAEDVKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDV 1460
            |.||:::::..:.|:|.:|||.  |:...:.:|...||:.|.|..|..|||||||.|.|....||
Zfish   632 SKEAVSILKAFMTKSPSKRLGCVVSQGLEDAIKVHPFFKDIDWVLLEQRKVKPPFKPRIKTKRDV 696

  Fly  1461 SNFDEEFTSEKAQLTPPKEP--RHLTEEEQLLFQDFSYTAE 1499
            :|||::||.|:..|||.::.  :.:.:||   |:.|||..|
Zfish   697 NNFDQDFTREEPVLTPVEDAIIKQINQEE---FKGFSYFGE 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:301316
STKc_PKN 1174..1499 CDD:270741 159/329 (48%)
S_TKc 1174..1433 CDD:214567 128/261 (49%)
prkcebXP_002664164.2 C2_PKC_epsilon 3..135 CDD:175981
C1_1 171..221 CDD:278556
C1_1 245..297 CDD:278556
STKc_nPKC_epsilon 413..733 CDD:270743 158/324 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170583341
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0694
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R891
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.770

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