DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkn and prkch

DIOPT Version :10

Sequence 1:NP_001097237.1 Gene:Pkn / 35950 FlyBaseID:FBgn0020621 Length:1501 Species:Drosophila melanogaster
Sequence 2:XP_002939521.2 Gene:prkch / 100151731 XenbaseID:XB-GENE-486685 Length:691 Species:Xenopus tropicalis


Alignment Length:416 Identity:176/416 - (42%)
Similarity:246/416 - (59%) Gaps:52/416 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly  1108 ELNVAKAAAAASV--------------------YSPSSSTTSNSNQQQQQQRRNVARGLQYRESG 1152
            |.|||......||                    :|.|.|..|:||..::....|.:.  ||:   
 Frog   287 EANVAHNCGVNSVDLANALAGMGLHPGNIPFKQHSVSGSVDSDSNHLEEDSISNTSS--QYK--- 346

  Fly  1153 GLETGRAGKQPPNAGMLSMDNFRLLSVLGRGHFGKVILSQLRSNNQYYAIKALKKGDIIARDEVE 1217
                            ..:|:|..|.|||:|.||||:|::.:.::..||:|.|||..|:..|:||
 Frog   347 ----------------FGIDDFTFLRVLGKGSFGKVMLAKSKESDSLYAVKVLKKDVILQDDDVE 395

  Fly  1218 SLLSEKRIFEVANAMRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH-TDVFLEPRAVFYAA 1281
            ..::||||..:  |..||||..|:.||||...:.||||:..|||||.||. :..|.|.||.||:|
 Frog   396 CTMTEKRILSL--ACNHPFLTQLFCCFQTLDRLFFVMEFVNGGDLMFHIQKSRRFDEARACFYSA 458

  Fly  1282 CVVLGLQYLHENKIIYRDLKLDNLLLDTEGYVKIADFGLCKEGMGFGDRTGTFCGTPEFLAPEVL 1346
            .:...|.:||:..:|||||||||:|||.||:.|:||||:||||:..|..|.||||||:::|||:|
 Frog   459 EITSALMFLHDKGVIYRDLKLDNVLLDHEGHCKLADFGMCKEGIREGCTTSTFCGTPDYIAPEIL 523

  Fly  1347 TETSYTRAVDWWGLGVLIFEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSLEAIAVMRRLLRK 1411
            .|..|...||||.:|||::|||.|.:||..::|:::|::|:||||.||.:||.:|:.:::..::|
 Frog   524 QEMQYGPLVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPGWLSQDAVEILQAFMKK 588

  Fly  1412 NPERRLGSSERDAED-VKKQAFFRSIVWDDLLLRKVKPPFVPTINHLEDVSNFDEEFTSEKAQLT 1475
            .|.:||||.....|. :....||:.|.||:|..:.::|||.|.|...|||||||.||..|.|.||
 Frog   589 KPAKRLGSLSLGGEKAILWHPFFKDINWDELNKKTIEPPFRPRIKAREDVSNFDPEFIKEDAVLT 653

  Fly  1476 PPKE---PRHLTEEEQLLFQDFSYTA 1498
            |..|   |  |..:|:  |::|||||
 Frog   654 PIDESLLP--LINQEE--FRNFSYTA 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PknNP_001097237.1 HR1_PKN_1 131..194 CDD:212012
HR1_PKN_2 243..309 CDD:212013
HR1_PKN_3 340..414 CDD:212015
C2 530..611 CDD:472691
STKc_PKN 1174..1499 CDD:270741 160/330 (48%)
prkchXP_002939521.2 C2_PKC_epsilon 7..139 CDD:175981
C1_nPKC_epsilon-like_rpt1 165..223 CDD:410385
C1_nPKC_epsilon-like_rpt2 243..297 CDD:410388 4/9 (44%)
STKc_nPKC_eta 356..678 CDD:270742 158/326 (48%)
Blue background indicates that the domain is not in the aligned region.

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