DRSC/TRiP Functional Genomics Resources

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Protein Alignment IL12RB2 and Dscam1

DIOPT Version :9

Sequence 1:NP_001361188.1 Gene:IL12RB2 / 3595 HGNCID:5972 Length:862 Species:Homo sapiens
Sequence 2:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster


Alignment Length:1019 Identity:198/1019 - (19%)
Similarity:339/1019 - (33%) Gaps:318/1019 - (31%)


- Green bases have known domain annotations that are detailed below.


Human     2 AHTFRGCSLA--------FMFIIT------WLL--------------IKAKIDACKRGDVTVKPS 38
            |||.|...:|        :...:|      |:|              ::.|.|...:..||.|.:
  Fly   694 AHTGRDTCIASNKAGTTTYSVDLTVNVPPRWILEPTDKAFAQGSDAKVECKADGFPKPQVTWKKA 758

Human    39 HVILLGST------VNITCSLKPRQGCFHYSRRNKLILYKFDRRINFHHGHSLNSQVTGLPLGTT 97
                :|.|      :..:.:::..:|..|.....|.           :.|:.|...:.|:..|.:
  Fly   759 ----VGDTPGEYKDLKKSDNIRVEEGTLHVDNIQKT-----------NEGYYLCEAINGIGSGLS 808

Human    98 LFVCKLACINSDEIQICGAEIFVGVAPE-------------QPQNLSCIQKGEQGTVACTWERG- 148
            ..:.                |.|...||             :|..|.|..|||: .:...|... 
  Fly   809 AVIM----------------ISVQAPPEFTEKLRNQTARRGEPAVLQCEAKGEK-PIGILWNMNN 856

Human   149 -----RDTHLYT--EYTLQLSGPKNLTWQKQCKDIYCDYLDFGINLTPESPESNFTAKVTAVNSL 206
                 ::.:.||  |..|......:|:                |..|..|..:.||.  .|.|:.
  Fly   857 MRLDPKNDNRYTIREEILSTGVMSSLS----------------IKRTERSDSALFTC--VATNAF 903

Human   207 GSSSSLPSTFTFLDIVRPLPPWDIRIKFQKASVSRCTLYWRD--EGLVLLNRL-----RYRPSNS 264
            ||..:     :...||:.:|.....:|....|.....|.|..  :|...|:|.     |.|.|.|
  Fly   904 GSDDA-----SINMIVQEVPEMPYALKVLDKSGRSVQLSWAQPYDGNSPLDRYIIEFKRSRASWS 963

Human   265 RLWNMV---NVTKAKGRHDLLDLKPFTEYEFQISSKLHLYKGSWSDWSESLRAQTPEEEPTGMLD 326
            .:..::   :.|:|:    :..|.|.|.|..:|.::..:   ..|..||::...|.||.|:|   
  Fly   964 EIDRVIVPGHTTEAQ----VQKLSPATTYNIRIVAENAI---GTSQSSEAVTIITAEEAPSG--- 1018

Human   327 VWYMKRHI---DYSRQQISLFWKNLSVSEARGKILHYQV--------------TLQELT-GGKAM 373
               ..::|   ..::..:.:.||....:|..|:||.|.|              |:..:| .||..
  Fly  1019 ---KPQNIKVEPVNQTTMRVTWKPPPRTEWNGEILGYYVGYKLSNTNSSYVFETINFITEEGKEH 1080

Human   374 T---QNITGHTSWTTVIPRTGNWAVAVSAANSKGSSLPTRINIMNLCEAGLLAPRQVSANSEG-- 433
            .   ||:..:|.::.||          .|.|..|              ||.|:..:....:||  
  Fly  1081 NLELQNLRVYTQYSVVI----------QAFNKIG--------------AGPLSEEEKQFTAEGTP 1121

Human   434 -------------MDNILVTW-QPPRKDPSAV-QEYVV------EWRELHPGGDTQVPLNWLRSR 477
                         ...|.|.| .||.:..:.| :.|.|      ||.:     :|:        |
  Fly  1122 SQPPSDTACTTLTSQTIRVGWVSPPLESANGVIKTYKVVYAPSDEWYD-----ETK--------R 1173

Human   478 PYNVSA---LISENIKSYICYEIRVYALSGDQGGCSS--ILGNSKHKAPLSGPHINAITEEKGSI 537
            .|..:|   .:...:|.|..|.::|.|.:....|..|  |...::...|.:...:.|:.....:|
  Fly  1174 HYKKTASSDTVLHGLKKYTNYTMQVLATTAGGDGVRSVPIHCQTEPDVPEAPTDVKALVMGNAAI 1238

Human   538 LISWNSIPVQEQMGCLLHYRIYWKERDSNSQPQLCEIPYRVSQNSHPINSLQPRVTYVLWMTALT 602
            |:||.  |..:..|.:..|.:|.|...:.::.:..::|:  .|.|.....|:....|..|:||.|
  Fly  1239 LVSWR--PPAQPNGIITQYTVYSKAEGAETETKTQKVPH--YQMSFEATELEKNKPYEFWVTAST 1299

Human   603 AAGESSHGNE---------------------REFCLQGKANWMAFVAPSICIAIIMVGIFSTHYF 646
            ..||......                     ..|....|...:|..||...|...:.|:..:...
  Fly  1300 TIGEGQQSKSIVAMPSDQVPAKIASFDDTFTATFKEDAKMPCLAVGAPQPEITWKIKGVEFSAND 1364

Human   647 QQKVF----VLLAALRPQWCSREIPDPANSTCAKKYPIAEEKTQLPLDRLLIDWPTPEDP----- 702
            :.:|.    :|:.::..|       |..:.:|..:..||::.    :...||....|:.|     
  Fly  1365 RMRVLPDGSLLIKSVNRQ-------DAGDYSCHAENSIAKDS----ITHKLIVLAPPQSPHVTLS 1418

Human   703 ----EPLVI--------SEVLHQVTPVFRHPPCSNWPQREKGIQGHQASEKDMMHSASSPPPPRA 755
                :.|.:        :..||..|..:: |....|...|..:.    |:|   |:.      ..
  Fly  1419 ATTTDALTVKLKPHEGDTAPLHGYTLHYK-PEFGEWETSEVSVD----SQK---HNI------EG 1469

Human   756 LQAESRQLV-----------DLYKVLESRGSDPKPENPACP-WTVLPAGDLPTH-----DGYLPS 803
            |...||..|           :...:|.:|....||:.|..| :..:.:..:..|     ||..|.
  Fly  1470 LLCGSRYQVYATGFNNIGAGEASDILNTRTKGQKPKLPEKPRFIEVSSNSVSLHFKAWKDGGCPM 1534

Human   804 NIDDLPSHEAPLADSLEELEPQHISLSVFPSSS-----LHPLTF 842
                  ||....:...:::|...||.:|.|.::     |.|.|:
  Fly  1535 ------SHFVVESKKRDQIEWNQISNNVKPDNNYVVLDLEPATW 1572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
IL12RB2NP_001361188.1 Lep_receptor_Ig 28..110 CDD:368845 12/87 (14%)
FN3 224..316 CDD:238020 22/101 (22%)
WSXWS motif 305..309 1/3 (33%)
FN3 423..511 CDD:238020 22/113 (19%)
FN3 521..615 CDD:238020 22/114 (19%)
Box 1 motif 662..670 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 725..755 5/29 (17%)
Required for STAT4 binding 796..801 3/9 (33%)
Dscam1NP_001246162.1 Ig 38..130 CDD:299845
IG 57..133 CDD:214652
IG_like 267..343 CDD:214653
Ig 269..340 CDD:143165
IG_like 353..425 CDD:214653
IGc2 361..413 CDD:197706
I-set 433..527 CDD:254352
IGc2 446..517 CDD:197706
I-set 533..618 CDD:254352
IGc2 544..607 CDD:197706
Ig 641..714 CDD:143165 5/19 (26%)
IGc2 735..804 CDD:197706 13/83 (16%)
I-set 819..914 CDD:254352 23/118 (19%)
Ig 833..921 CDD:299845 24/111 (22%)
FN3 918..1011 CDD:238020 22/99 (22%)
FN3 1018..1116 CDD:238020 25/127 (20%)
FN3 1124..1217 CDD:238020 22/105 (21%)
FN3 1222..1312 CDD:238020 22/93 (24%)
Ig 1339..1406 CDD:299845 13/77 (17%)
FN3 1409..1499 CDD:238020 17/103 (17%)
FN3 1504..1584 CDD:238020 17/75 (23%)
Dscam_C 1890..2008 CDD:289151
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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