DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hig and SELE

DIOPT Version :9

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_000441.2 Gene:SELE / 6401 HGNCID:10718 Length:610 Species:Homo sapiens


Alignment Length:452 Identity:111/452 - (24%)
Similarity:166/452 - (36%) Gaps:122/452 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 WRKTRLSKSTL-------LSNTEINVGWDLPHGHSLQ------ARCQELGIYKLLGESRVLCSNG 588
            |...|.||..|       .:||..:     .||..::      .:| :.|...|..|..|.|: .
Human   125 WNDERCSKKKLALCYTAACTNTSCS-----GHGECVETINNYTCKC-DPGFSGLKCEQIVNCT-A 182

  Fly   589 LWAPRMPSCVPTTVLTNYSEDSAPSIRIKIFNGSHSFEPSGVMAVPPHSTVLMDCMYPRVRGTPE 653
            |.:|...|.|.:..|.|:|.:|:.||..          ..|.:   |.|...|.||     .:.|
Human   183 LESPEHGSLVCSHPLGNFSYNSSCSISC----------DRGYL---PSSMETMQCM-----SSGE 229

  Fly   654 WSWTSWYMQYSTGWSPAQEEKAVRYRLSIKNIEN------NDSGTF----TCTSPRGLTNSIAVV 708
            ||            :|......|... ::.|..|      .:.|:|    |||            
Human   230 WS------------APIPACNVVECD-AVTNPANGFVECFQNPGSFPWNTTCT------------ 269

  Fly   709 VATSTCPQLTEPLAPLKLRLEGNKLGQRAHYECPEGFRLDGAWNATCLASGNWSSPTPTCHAIQC 773
                                          ::|.|||.|.||.:..|.:||||.:..|||.|:.|
Human   270 ------------------------------FDCEEGFELMGAQSLQCTSSGNWDNEKPTCKAVTC 304

  Fly   774 PRLELDDPHLSLIELNTSAWGRAVFK------CQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQC 832
            ..:.  .|....:..:.|..|...||      |:.||.|.||||::|...|.|:..:|.|:..||
Human   305 RAVR--QPQNGSVRCSHSPAGEFTFKSSCNFTCEEGFMLQGPAQVECTTQGQWTQQIPVCEAFQC 367

  Fly   833 VMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENGQWSHSPPFCKS-QCPY 896
            .....|..|.:.....:......|:...|||..|..|.|...:.|...|:|.:..|.|:: :|..
Human   368 TALSNPERGYMNCLPSASGSFRYGSSCEFSCEQGFVLKGSKRLQCGPTGEWDNEKPTCEAVRCDA 432

  Fly   897 PGDPPNGLI----APL-KFNYDAGDYLSVQCRPGFVQSYEGPPERPKCQPDGRWSGPMPKCK 953
            ...||.||:    :|: :|.|.:.  .:..|..||  ...|..:. :|...|:|:..:|.|:
Human   433 VHQPPKGLVRCAHSPIGEFTYKSS--CAFSCEEGF--ELHGSTQL-ECTSQGQWTEEVPSCQ 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 PHA02927 705..952 CDD:222943 67/258 (26%)
CCP 714..768 CDD:153056 13/53 (25%)
CCP <795..828 CDD:153056 14/38 (37%)
CCP 832..891 CDD:153056 14/58 (24%)
Sushi 894..952 CDD:278512 16/62 (26%)
SELENP_000441.2 CLECT_selectins_like 22..140 CDD:153062 5/14 (36%)
Carbohydrate binding. /evidence=ECO:0000269|PubMed:26117840, ECO:0007744|PDB:4C16, ECO:0007744|PDB:4CSY 101..109
Carbohydrate binding. /evidence=ECO:0000269|PubMed:26117840, ECO:0007744|PDB:4C16, ECO:0007744|PDB:4CSY 113..118
Carbohydrate binding. /evidence=ECO:0000269|PubMed:26117840, ECO:0007744|PDB:4C16, ECO:0007744|PDB:4CSY 126..128 0/1 (0%)
EGF_CA <148..175 CDD:238011 5/32 (16%)
CCP 199..425 CDD:332582 73/300 (24%)
CCP 333..547 CDD:332582 46/162 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19325
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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