DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hig and svep1

DIOPT Version :9

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_695742.6 Gene:svep1 / 567357 ZFINID:ZDB-GENE-110726-1 Length:3615 Species:Danio rerio


Alignment Length:777 Identity:171/777 - (22%)
Similarity:262/777 - (33%) Gaps:238/777 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 PKEDELELDHPETAAAHHRRRG---DSHAAELDQRD----RSPRWRRRRSTEFKGDLGQLPPESG 355
            |:...::...|.....|...||   ||...||...:    ...|..|...::...|...:..:..
Zfish  2319 PRCSPVQCPEPPLEENHLVLRGLDSDSGTVELSCEEGYVLHGARTLRCTPSQEWNDSFPVCKQVF 2383

  Fly   356 IGPEPEPLADQDLKDLQQYGNQSSSARVALLWQRVKRKSG----KTTGALSRPK----------- 405
            .||.|| :|..|..|.|.|  ..|....:.:.....||.|    :..|..|:|.           
Zfish  2384 CGPPPE-VAFGDPSDTQSY--FGSVVTYSCMDGFTLRKEGSVHCQANGNWSKPYPQCIPVECPHP 2445

  Fly   406 ---GGGDSSSKTTSRKDKGIYDEEAGYTPIHPDDPEFDEEEEEDEEVDILQQFTEVSEIRFPGEI 467
               ..|....:........:|..:|||                    |||...|           
Zfish  2446 EDIPNGIVDVQGLMYLSTAVYSCKAGY--------------------DILGNST----------- 2479

  Fly   468 GPMGDRRLCKIRC-VKGKWVGPL-------CATNEEDDNGNVKFQPLYKSCHVNRIPSHLLLSYR 524
                      :.| ..|:|:|.:       ||..:|..||:|::..|..|..:...         
Zfish  2480 ----------VLCGQSGQWIGGIPVCHPVKCAAPKEIPNGSVRYSKLQFSQSITYF--------- 2525

  Fly   525 NISVTPIPPNRGWRKTRLSKSTLLSNTEINVGWD----------------LPHGHSLQARCQELG 573
                    ..||:|.......|.|.|.:    ||                :.:|. ::.|.::.|
Zfish  2526 --------CQRGYRIQGPETLTCLENGQ----WDQEAPTCVPIYCSPPKPIDNGF-VEGRDRKFG 2577

  Fly   574 I---------YKLLGESRVLCSNGLWAPRMPSCV-------PTTVLTNYSE--------DSAPSI 614
            :         :.|:|.:.:.|.:..|:...|.||       |.....:||:        |...|.
Zfish  2578 VTIFYSCFPGFLLVGNNHLTCEDHGWSSSEPKCVLADCGLPPHIDFGDYSKVQELSAEYDMVTSQ 2642

  Fly   615 RIKIFNGSHSFEPSGVMAVPPHS------TVLMDCMYPRVRGTPEWSWT---------------- 657
            ::.:.|   ||....::....||      .:::.|   |..||  |:.|                
Zfish  2643 QLPVDN---SFLHGSLVKYHCHSGYEINGAIMLMC---REDGT--WNGTAPMCTPAQCEAPPSPE 2699

  Fly   658 --SWYMQYSTGWSPAQEEKAVRYRLSIKNIENNDSG-----------TFTCTSPRGLTNSIAVVV 709
              |..:..|...|.|:...|..|.|:.:.|....||           ..:|.:|.|:.|      
Zfish  2700 NGSVMVTDSALGSLAEYSCAEGYELNGQTIRQCISGQQWSDDAPRCLPISCGNPGGIAN------ 2758

  Fly   710 ATSTCPQLTEPLAPLKLRLEGNKLG------QRAHYECPEGFRLDGAWNATCLASGNWSSPTPTC 768
                                |..:|      :..||||..||.|:|....||...|.|.:..|.|
Zfish  2759 --------------------GEVIGKSFHFKELIHYECHSGFVLEGVETRTCQVDGKWDNKAPLC 2803

  Fly   769 HAIQCPRLELDDPHLS---LIELNTSAWG-RAVFKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKV 829
            ..:.|.|     |.:|   |:..:...:| |.:|.|..||.|.|...:.|..:|.|:...|:|..
Zfish  2804 KEVSCGR-----PVVSKDVLVRGDDHTFGKRLLFSCNLGFILLGAPTIVCLANGSWNEVPPKCLP 2863

  Fly   830 IQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENGQWSHSPPFCK-SQ 893
            ..|..|.:..|||:.||...     ...:|.::|:.|:.|.|..::||..:|.|...||.|. ..
Zfish  2864 ANCGQPPSIENGRVTGTDYG-----YNGMVRYACDIGYVLTGNPTLICRADGLWDDPPPRCDIIT 2923

  Fly   894 CPYPGDPPNGLIAPLKFNYDAGDYLSVQCRPGFVQSYE--GPPERPKCQPDGRWSGPMPKCK 953
            |..|.|..:|.:....||:|  |.:...|.||    ||  |.|.. :|..:|.|.|.:|:|:
Zfish  2924 CDPPEDISHGYLNGSSFNFD--DIVEYICFPG----YEVVGSPIL-RCAAEGVWLGQVPECR 2978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 PHA02927 705..952 CDD:222943 73/259 (28%)
CCP 714..768 CDD:153056 15/59 (25%)
CCP <795..828 CDD:153056 11/32 (34%)
CCP 832..891 CDD:153056 18/58 (31%)
Sushi 894..952 CDD:278512 20/59 (34%)
svep1XP_695742.6 VWA 78..253 CDD:278519
GCC2_GCC3 305..355 CDD:285001
CCP 373..429 CDD:153056
CCP 433..489 CDD:153056
CCP 493..550 CDD:153056
HYR 554..636 CDD:280629
DUF5011 637..716 CDD:295940
CCP 721..772 CDD:153056
GCC2_GCC3 1007..1054 CDD:285001
GCC2_GCC3 1061..1108 CDD:285001
GCC2_GCC3 1115..1162 CDD:285001
EGF_CA 1197..1230 CDD:238011
EGF_CA 1232..1268 CDD:238011
EGF_CA 1271..1306 CDD:238011
EGF_CA 1309..1344 CDD:238011
EGF_CA 1346..1382 CDD:238011
EGF_CA 1384..1420 CDD:238011
LamG 1420..1621 CDD:304605
Sushi <1649..1685 CDD:278512
CCP 1690..1743 CDD:153056
EGF_3 1755..1783 CDD:289699
CCP 1789..1843 CDD:153056
CCP 1847..1901 CDD:153056
CCP 1905..1958 CDD:153056
CCP 1963..2017 CDD:153056
CCP 2021..2079 CDD:153056
CCP 2083..2136 CDD:153056
PHA02927 2139..2379 CDD:222943 12/59 (20%)
CCP 2146..2200 CDD:153056
CCP 2204..2257 CDD:153056
CCP 2267..2321 CDD:214478 1/1 (100%)
CCP 2326..2380 CDD:153056 11/53 (21%)
CCP 2384..2438 CDD:153056 16/56 (29%)
CCP 2442..2495 CDD:214478 13/93 (14%)
CCP 2500..2554 CDD:153056 16/74 (22%)
CCP 2558..2611 CDD:153056 8/53 (15%)
CCP 2615..2687 CDD:153056 16/79 (20%)
CCP 2692..2745 CDD:214478 10/52 (19%)
CCP 2750..2804 CDD:153056 19/79 (24%)
CCP 2808..2861 CDD:153056 17/57 (30%)
CCP 2866..2919 CDD:153056 18/57 (32%)
CCP 2924..2978 CDD:153056 20/60 (33%)
CCP 2984..3034 CDD:214478
PHA02927 3034..3269 CDD:222943
CCP 3042..3094 CDD:153056
CCP 3098..3153 CDD:153056
PHA02927 3149..3454 CDD:222943
CCP 3157..3211 CDD:153056
CCP 3216..3269 CDD:214478
CCP 3274..3328 CDD:153056
Sushi 3333..3385 CDD:278512
CCP 3457..3510 CDD:153056
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31246at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.