DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hig and Sell

DIOPT Version :9

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_030108191.1 Gene:Sell / 20343 MGIID:98279 Length:387 Species:Mus musculus


Alignment Length:286 Identity:71/286 - (24%)
Similarity:106/286 - (37%) Gaps:74/286 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   654 WSW-------TSWYMQYSTGWSPAQEEKAVRYRLSIKNIENNDSGTF---TCTSPRGLTNSIAVV 708
            |:|       |.....:..|....::.|.....:.||  ...|||.:   .|...:      |.:
Mouse    98 WTWVGTNKTLTKEAENWGAGEPNNKKSKEDCVEIYIK--RERDSGKWNDDACHKRK------AAL 154

  Fly   709 VATSTCPQLTEPLAPLKLRLEGNKLGQRAHYECPEGFRLDGAWNATCLASGNWSSPTPTC-HAIQ 772
            ..|::|    :|         |:..|:.   ||.|...     |.||:....:..  |.| :.:|
Mouse   155 CYTASC----QP---------GSCNGRG---ECVETIN-----NHTCICDAGYYG--PQCQYVVQ 196

  Fly   773 CPRLELDDPHLSLIEL-----NTSAWGRAVFKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQC 832
            |..||.  |.|..::.     |.|...:..|.|..|.:|.|.|:..|..||.||.|.|.|:|:||
Mouse   197 CEPLEA--PELGTMDCIHPLGNFSFQSKCAFNCSEGRELLGTAETQCGASGNWSSPEPICQVVQC 259

  Fly   833 VMPVAPLNGR------IGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENGQWSHSPPFCK 891
            ....||..|.      :|..|...:       ..|:|::|..|:|.:...|..:|.||...|.|:
Mouse   260 EPLEAPELGTMDCIHPLGNFSFQSK-------CAFNCSEGRELLGTAETQCGASGNWSSPEPICQ 317

  Fly   892 SQCPYPGDPPNGLIAPLKFNYDAGDY 917
            .        .|...:.:|    .|||
Mouse   318 E--------TNRSFSKIK----EGDY 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 PHA02927 705..952 CDD:222943 60/225 (27%)
CCP 714..768 CDD:153056 11/53 (21%)
CCP <795..828 CDD:153056 13/32 (41%)
CCP 832..891 CDD:153056 16/64 (25%)
Sushi 894..952 CDD:278512 5/24 (21%)
SellXP_030108191.1 CLECT_selectins_like 39..157 CDD:153062 12/66 (18%)
EGF_CA 160..192 CDD:238011 11/54 (20%)
CCP 197..255 CDD:153056 20/59 (34%)
CCP 259..317 CDD:153056 16/64 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19325
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.100

Return to query results.
Submit another query.