DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and lev-9

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:NP_001335574.1 Gene:lev-9 / 188252 WormBaseID:WBGene00002976 Length:1347 Species:Caenorhabditis elegans


Alignment Length:530 Identity:145/530 - (27%)
Similarity:225/530 - (42%) Gaps:68/530 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 IRCVKGKWVGPL--CA----TNEEDDNGNVKFQPL-----YKSCHV-NRIPSHL----------- 519
            |.||.|:||..|  |.    ||.:....:....||     .|..:| |.||.|:           
 Worm   826 IECVNGEWVSNLLPCVTANITNWKTPTNDEMCPPLRLELNQKIFNVENYIPHHMHLFAHGTILNV 890

  Fly   520 --LLSYRNISVTPIPPNRG-W---RKTRLSKSTLLSNTEINV-----------------GWDLPH 561
              |.:..:....||...|| |   :|...||:..:...::|:                 ..:...
 Worm   891 GCLTTSNSAETVPIKCRRGKWGYKKKLNCSKTETICTLKMNINSHTVIYHTQKKETVVFNQNFES 955

  Fly   562 GHSLQARCQELGIYKLLGESRVLCSNGLWAPRMPSCVPTTVLTNYSEDSAPSIRIKIFNGSHSFE 626
            |..|..||..:|:.:|.|:..:.|.||:|:..:|.|:|...    :..|.| |:..:.:|:|:..
 Worm   956 GSKLLFRCANIGLEQLHGKKELQCYNGVWSSPIPYCIPIQA----TGTSVP-IKYSVTHGTHAIS 1015

  Fly   627 PSGVMAVPPHSTVLMDCMYPRVRGTPEWSWTSWYMQYSTGWSPAQE---EKAVRYRLSIKNIENN 688
            ..|.:.|...:.|.:.|:..:|...|.|..||.|..|.|.|:.|:.   :....:.:||.:::..
 Worm  1016 SKGELIVSRAANVKLACLTEKVASDPIWKVTSTYRSYPTQWTKAKTGDYDDIDGFEISIASVQPF 1080

  Fly   689 DSGTFTCTSPRGLTNSIAVVVATSTCPQLTEPLAPLKLRLEGNK----LGQRAHYECPEGFRLDG 749
            |||...|..|.|..|||.::|....|   ..|:.|..|:::.:.    :|..|.:.||.||.::|
 Worm  1081 DSGMLHCVLPNGARNSIKLIVHEEKC---LLPIGPTNLQVDLSSPTLFVGTVAQFSCPPGFSVEG 1142

  Fly   750 AWNATCLASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDC 814
            :..:|||....||...|.|.|..||.:.::...:::...:....|.|.|||..||.|.|...|.|
 Worm  1143 SAVSTCLEDATWSHSAPRCVAAHCPAVFVNGTRMTVTVTSYRTGGVAHFKCHKGFTLIGEQNLHC 1207

  Fly   815 EPSGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTE 879
            ...|.||...|.|.|:.|...:.|.||...|.  .:...|.|.:|...|...:.|.|....:|..
 Worm  1208 TTQGTWSHDFPYCNVVHCPPLLPPANGHFIGE--PKEINTKGDIVLLGCLPNYMLTGGDFSVCQA 1270

  Fly   880 NGQWSHSPPFCKSQCPYPGDPPNGLIAPL-KFNYDAGDYLSVQCRPGFVQSYEGPPERP-KCQPD 942
            :|:||.....|...|.:||.|.:|....: |..|..|:.:...| |.  |:|:...:.. .|...
 Worm  1271 DGEWSEIKTKCDGYCRHPGQPDHGATTTIAKDYYSIGEKIVFYC-PS--QNYKLSSDNVLVCISP 1332

  Fly   943 GRWSGPMPKC 952
            |:||..:|.|
 Worm  1333 GQWSRRLPLC 1342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 23/86 (27%)
PHA02927 705..952 CDD:222943 73/252 (29%)
lev-9NP_001335574.1 WAP 18..60 CDD:459672
CCP 64..119 CDD:153056
PHA02927 127..363 CDD:222943
PHA02927 <377..557 CDD:222943
Ig 1015..1101 CDD:472250 25/85 (29%)
Ig strand B 1028..1032 CDD:409353 1/3 (33%)
Ig strand E 1070..1074 CDD:409353 0/3 (0%)
PHA02927 1106..1343 CDD:222943 72/245 (29%)
Blue background indicates that the domain is not in the aligned region.

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