DRSC/TRiP Functional Genomics Resources

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Protein Alignment hig and selp

DIOPT Version :10

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_031756924.1 Gene:selp / 100485005 XenbaseID:XB-GENE-482807 Length:976 Species:Xenopus tropicalis


Alignment Length:556 Identity:139/556 - (25%)
Similarity:208/556 - (37%) Gaps:119/556 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   478 IRCVKGKWVG--PLCATNE--------------EDDNGNVKFQPLYKS-CHVNRIPSHLLLSYRN 525
            |:| |.:|.|  |.||..:              :|:.|  |||  |.| |..:......|....:
 Frog   220 IQC-KEEWSGLVPQCAVVDCPRLVVPELGSMECKDEYG--KFQ--YNSNCSFSCNEGFTLTGPNS 279

  Fly   526 ISVT------------------PIP-PNRGWRKTRLSKSTLLSNT----EINVGWDLPHGHSLQA 567
            :..|                  .|| |..|..|..........|:    ..|.|:.|...:|||.
 Frog   280 LQCTSSGSWSSDVPACKAVVCPSIPVPEHGSMKCEDDYEEFQYNSNCSFSCNEGFTLAGSNSLQC 344

  Fly   568 RCQELGIYKLLGESRVLCSNGLWAPRMPS-----CVPTTVLTNYS---EDSAPSIRIK------- 617
                             .|:|.|:..:|:     |.|.|...:.|   ||.....:..       
 Frog   345 -----------------TSSGSWSSNVPTCEAVVCPPITCPEHGSKECEDDFGEFQYNSNCSFSC 392

  Fly   618 ----IFNGSHSFE--PSGVMAVPPHSTVLMDC---MYPRVRGTPEWSWTSWYMQYSTGWSPAQEE 673
                |..||:|.:  .||..:....:...:||   :.|.: |:.|........:|::..|.:.:|
 Frog   393 SEGFILTGSNSLQCTSSGSWSSDVPACKAVDCPHLVVPEL-GSMECKDEHGEFKYNSNCSFSCKE 456

  Fly   674 KAVRYRLSIKNIENNDSGTFTCTSPRGLTNSIAVVVATSTCPQLTEP-LAPLKLR--LEGNKLGQ 735
                      .....:|.:..|||....::.:....|. .||.:..| ...:|..  .|..:...
 Frog   457 ----------GFTLTESNSLQCTSSGSWSSDVPACKAV-VCPSIPVPEHGSMKCEDDYEEFQYNS 510

  Fly   736 RAHYECPEGFRLDGAWNATCLASGNWSSPTPTCHAIQCPRLELDDPHLSLIELNTSAW---GRAV 797
            :..:.|.|||.|.|:.:..|.:||:|||..|||.|:.||.:.|.:......|.:...:   ....
 Frog   511 KCSFSCNEGFILAGSNSLQCTSSGSWSSDVPTCKAVVCPSIPLPEHGSKECENDYGEFQYNSNCS 575

  Fly   798 FKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQCVMPVAPLNGRIGGTSLSQR--RLTVGALVT 860
            |.|..||.||||..|.|..||.||..||.||.:.|...|.|   .:|.......  |....:..:
 Frog   576 FSCSEGFTLTGPNSLQCTSSGSWSSDVPACKAVDCPHLVVP---ELGSMECKDEYGRFQYNSNCS 637

  Fly   861 FSCNDGHSLVGESSIICTENGQWSHSPPFCKS-QCPYPGDPPNGLIAPL----KFNYDAGDYLSV 920
            |||.:|.:|.|.:|:.|..:|.|....|.|:: .||....|.:|.|...    ||.|::.  .||
 Frog   638 FSCKEGFTLTGSNSLQCISSGSWGSDVPTCEAVACPDIPVPEHGFIKCEDDYGKFQYNSN--CSV 700

  Fly   921 QCRPGFVQSYEGPPERPKCQPDGRWSGPMPKCKSYE 956
            .|..||   :....:..||...|.||..:|.|::.:
 Frog   701 SCNEGF---FLTGSDSLKCTSSGSWSSDVPACEAVQ 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 Ig_3 612..696 CDD:464046 15/99 (15%)
PHA02927 705..952 CDD:222943 80/259 (31%)
selpXP_031756924.1 CLECT_selectins_like 20..138 CDD:153062
EGF_CA 142..173 CDD:238011
PHA02927 178..419 CDD:222943 46/220 (21%)
PHA02927 439..667 CDD:222943 67/241 (28%)
CCP 672..730 CDD:153056 19/62 (31%)
PHA02927 <710..909 CDD:222943 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.

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