DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hig and si:ch73-217n20.1

DIOPT Version :9

Sequence 1:NP_724773.1 Gene:hig / 35949 FlyBaseID:FBgn0010114 Length:958 Species:Drosophila melanogaster
Sequence 2:XP_009295403.1 Gene:si:ch73-217n20.1 / 100329788 ZFINID:ZDB-GENE-110411-232 Length:704 Species:Danio rerio


Alignment Length:513 Identity:121/513 - (23%)
Similarity:191/513 - (37%) Gaps:112/513 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   465 GEIGPMGD----RRLCKIRCVKG-KWVGPLCATNEEDDNGNVKFQPLYKSCHVNRIPSHLLLSYR 524
            |.|...|:    |....|.|.:| :.:|....|...|.    ::|.| ..||..|..::::    
Zfish   279 GRINAFGNQHKPRDTVSITCSEGFELIGSPQVTCGPDG----QWQSL-PECHPKRRSANVI---- 334

  Fly   525 NISVTPIPPNRGWRKTRLSKSTLLSNTEINV-GWDLPHGHSLQARCQELGIYKLLGESRVLCS-N 587
                             ...:.:::|..||. |.......::...|.| | ::|:|.|:|.|. :
Zfish   335 -----------------FCSAPVVANGRINAFGNQHKPKDTVSITCSE-G-FELIGSSQVTCGPD 380

  Fly   588 GLWAPRMPSCVPTTVLTNYSEDSAPSI---RIKIFNGSHSFEPSGVMAVPPHSTVLMDCM----- 644
            |.| ..:|.|.|...|.|.:..|||::   ||..|  .::|:|.        .||.:.|.     
Zfish   381 GQW-QGLPECRPKKHLVNVNLCSAPAVANGRINEF--GNTFKPK--------DTVSIICSEGFDL 434

  Fly   645 --YPRVRGTPEWSWTSWYMQYSTGWSPAQEEKAVRYRLSIKNIENNDSGTFTCTSPRGLTNSIAV 707
              .|:|...|:..|.|         .|....|.        .:.|...|    ..|..|.:::..
Zfish   435 IGSPQVTCGPDGQWQS---------LPECHPKT--------RLANGKCG----PPPSYLHHNVFF 478

  Fly   708 VVATSTCPQLTEPLAPLKLRLEGNKLGQRAHYECPEGFRLDGAWNATCLASGNWSSPTPTCHAIQ 772
            ...|   |.|.|           ...|.|..|:|..|.|.....:......|.|:.....|....
Zfish   479 REGT---PSLAE-----------YSSGARIRYKCNLGLRRASGSDIIRCQGGEWTKLALRCQRKS 529

  Fly   773 C---PRLELDDPHLSLIELNTSAWGRAVFKCQWGFKLTGPAQLDCEPSGVWSGPVPRCKVIQCVM 834
            |   ..:.......|.:....||  ||:  ||.|::|.||.:..|...| |.|.:|.|:.:.|..
Zfish   530 CGSAGEISFGRFQYSGVLFGDSA--RAI--CQEGYELIGPEERVCRDGG-WDGRIPVCEPVYCPP 589

  Fly   835 PVAPLNGRIGGTSLSQRRLTVGALVTFSCNDGHSLVGESSIICTENGQWSHSPPFCKS-QCPYPG 898
            |....:..:  :......:.||.:|::.|..| :|:|...:.||.||.||...|.||. .||.|.
Zfish   590 PPEVKDAEV--SDFRNEDVPVGHMVSYRCQTG-ALIGTQDLYCTTNGTWSGPAPLCKDISCPRPD 651

  Fly   899 DPPNGLIAPLKFNYDAGDYLSVQCRPG---FVQSYEGPPERPKCQPDGRWSGPMPKCK 953
            .|....:...:..|..|:.:::.|.||   :.:|:      ..|..||.|:..:|:|:
Zfish   652 IPRGSRMRGFRSVYKYGNTVTIACSPGLRLYGESF------VTCGADGNWTPKLPECR 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
higNP_724773.1 PHA02927 705..952 CDD:222943 64/253 (25%)
CCP 714..768 CDD:153056 11/53 (21%)
CCP <795..828 CDD:153056 13/32 (41%)
CCP 832..891 CDD:153056 16/58 (28%)
Sushi 894..952 CDD:278512 15/60 (25%)
si:ch73-217n20.1XP_009295403.1 CCP 25..84 CDD:153056
CCP 88..140 CDD:153056
CCP 147..201 CDD:153056
CCP 210..264 CDD:153056
CCP 271..324 CDD:153056 12/49 (24%)
CCP 336..390 CDD:153056 15/56 (27%)
CCP 401..454 CDD:153056 17/71 (24%)
CCP 465..526 CDD:153056 15/78 (19%)
CCP 530..583 CDD:153056 17/57 (30%)
CCP 587..643 CDD:153056 16/58 (28%)
CCP 647..703 CDD:153056 15/61 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19325
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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