DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p3 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001038763.1 Gene:cyp46a1.3 / 692332 ZFINID:ZDB-GENE-060519-40 Length:491 Species:Danio rerio


Alignment Length:453 Identity:105/453 - (23%)
Similarity:196/453 - (43%) Gaps:75/453 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 HSRDC----AKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLINKGTIYD-----FLHPFLRT 127
            |..|.    |:|.|..|...:....|.||...::.:.::..|..:....||.     |...||..
Zfish    63 HMNDLLLIWAEKYGPVYRLNSFHYVIINVHCPEATKTIMMSPKYLKDPFIYKRLFGLFGKRFLGY 127

  Fly   128 GLLTSTGKK-WHARRKMLSPTFHFNILNQFQEIFITESLKFLEQFKGNDEAIIS-----LNEVIP 186
            ||:|:|... |:.:|:::.|.|..:.|......|...|.:.:::.   :|..|:     :::::.
Zfish   128 GLVTATDHDIWYRQRRIMDPAFSSSYLRGLISTFNEMSERLMDKL---EEMAINKTPAVMHDLVN 189

  Fly   187 RFTLNSICETAMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLLWSDTLFKMFAEKDYASALD 251
            ..||:.||:.|.||.|:...:..:.:::...|..:..:..:.:|       |..|..|:: .|:.
Zfish   190 CVTLDIICKVAFGVDLNLFKQTDNPFQQAIEQCLQGMVLDLRDP-------FCKFFPKNW-KAIQ 246

  Fly   252 VVHGFSSEIIAKRRDQ----------LNDEIDSRGNTQ---TAEDELFTSKKRFAMLDTLILAEK 303
            ...| ::.::.|..:|          :.:::.:...||   ||::|...:.|             
Zfish   247 ETKG-ATVLLRKTGEQWIQNRKTAVEIGEDVPNDILTQILKTAKEEKVNNTK------------- 297

  Fly   304 DGLIDHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELNI---LNI 365
                ||..:.:...|....|.:||:..|.|.:|.:..:||    .|:..:|.:|:.|..   ::.
Zfish   298 ----DHEQMLDNFVTFFIAGQETTANQLSFAIMELGRHPE----IYKRAKAEVDEVLGTKRDISY 354

  Fly   366 GQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSP 430
            ..|.|...|...:|||:||:|:.|...| ...|..:.||:.:|.|..:....:...|..:::..|
Zfish   355 EDLGKFTYLSQVLKETLRLYPTAPGTNR-WLHEDMVINGIKIPGGISVIFSSYVAQRLEKHFKDP 418

  Fly   431 EEFRPERFLPENSQNRHTYAYIPFSAGQRNCIGQKF--------AMQEMKTLMVALLKQFQIL 485
            .:|.||||  ..:..:..|.|.|||.|.|:|:||.|        |:.::.|.::.|...|.|:
Zfish   419 LKFDPERF--NVNAPKPYYCYYPFSLGPRSCLGQVFSQATPAEGALAQLLTQLLTLCSHFLIV 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 105/453 (23%)
cyp46a1.3NP_001038763.1 p450 39..452 CDD:278495 99/424 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.