DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p3 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:529 Identity:126/529 - (23%)
Similarity:235/529 - (44%) Gaps:67/529 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLILWLVGAFIVLIQWIYRLNRDYCIL------GFFAKRIRTKNGQNPESIAPLVKGSTIFANSF 59
            :|:..::..|::...:|:.::..|..:      .||.       |.:| ::..|:|.:.:     
 Frog    13 LLLALILICFLLFSGYIHYIHMKYDHIPGPPRDSFFL-------GHSP-TMLRLMKNNLL----- 64

  Fly    60 DLYGKDHSGVFEHSRDCAKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLINKGTIYD----- 119
                     :::|.....:|.|.......:...|..|:..::.:.:|..|. .:|...||     
 Frog    65 ---------MYDHFLGWVQKYGPVVRINGLHRVIILVVSPEAVKELLMSPK-YSKDKFYDVIANM 119

  Fly   120 FLHPFLRTGLLTSTG-KKWHARRKMLSP----TFHFNILNQFQEIFITESL--KFLEQFKGNDEA 177
            |...|:..||:|... ..||.:|:::.|    |:...::..|.|  ..|.|  |.:|:..|..| 
 Frog   120 FGVRFMGKGLVTDRDYDHWHKQRRIMDPAFSRTYLMGLMGPFNE--KAEELMEKLMEKADGKCE- 181

  Fly   178 IISLNEVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLLWSDTLFKMFA 242
             |.:::::.|.||:.|.:.|.|::|:.:.:....:.:....:.:..: .|.||::......:.|.
 Frog   182 -IKMHDMLSRLTLDVIGKVAFGMELNSLNDDLTPFPKAISLVMKGIV-EMRNPMVRYSLAKRGFI 244

  Fly   243 EKDYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFTSKKRFAMLDTLILAEKDGLI 307
            .| ...::.::.....|.|.:|:.|:.|      ..:...|.|....|..||.:.   .:.:.|:
 Frog   245 RK-VQESIRLLRQTGKECIERRQKQIQD------GEEIPVDILTQILKGAAMEEE---CDPEILL 299

  Fly   308 DHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLK 372
            |:.      .|....|.:||:..|.|.:|.:...||..||...||...|..:.:| ....|.||:
 Frog   300 DNF------VTFFIAGQETTANQLSFVVMELGRNPEILEKAQAEIDEVIGSKRDI-EYEDLGKLQ 357

  Fly   373 NLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSPEEFRPER 437
            .|...:|||:||:|:.|...|..| |..:.:|:.:|:...|.::.:.:.|..:|:..|..|.|:|
 Frog   358 YLSQVLKETLRLYPTAPGTSRGLT-EDMVIDGVKVPENVTIMLNSYIMGRMEQYYSDPLTFNPDR 421

  Fly   438 FLPENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTIVFQTGLTLR 502
            |.|:  ..:..|:|.|||.|.|:||||.|:..|.|.:|..||::::..........:..|| |||
 Frog   422 FSPD--APKPYYSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRYEFELAEGQSFKILDTG-TLR 483

  Fly   503 TKNQIHVKL 511
            ..:.:..:|
 Frog   484 PLDGVICRL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 115/462 (25%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 121/499 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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