DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p3 and cyp4b1.2

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001017348.1 Gene:cyp4b1.2 / 550102 XenbaseID:XB-GENE-963387 Length:515 Species:Xenopus tropicalis


Alignment Length:544 Identity:162/544 - (29%)
Similarity:264/544 - (48%) Gaps:82/544 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WL------VGAFIVLIQWIYRLNRDYCILG----FFAKRIR----------------TKNGQNPE 43
            ||      :|.|:.|:..:..|.:.|.:..    |.|..:.                .::|::.:
 Frog    13 WLSVNIYQIGQFVALLCVVLLLLKAYALYSRGRRFAAALVPFPGPPAHWLYGHVNQFRRDGKDLD 77

  Fly    44 SIAPLVKGSTIFANSFDLYGKDHSGVFEHSRDCAKKLGKSYAEYAMGTAIYNVIDADSAERVL-- 106
            .:...|..   :.|:|.|:                 :||.:     ||.|  :.|.|.|:.|.  
 Frog    78 RLMVWVNK---YPNAFPLW-----------------IGKFF-----GTLI--ITDPDYAKVVFGR 115

  Fly   107 NDPNLINKGTIYDFLHPFLRTGLLTSTGKKWHARRKMLSPTFHFNILNQFQEIFITESLKF---- 167
            :||   ...|.|:||.|::..|||..:|..|...|::::|.||:::|..:..: |::|.|.    
 Frog   116 SDP---KTSTGYNFLVPWIGKGLLILSGNTWFQHRRLITPGFHYDVLKPYVSL-ISDSTKIMLDE 176

  Fly   168 LEQFKGNDEAIISLNEVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLL 232
            |:.:...||: :.|.:.:...||:||.:.|.....:...:|.:.|.:....:.....:|:.....
 Frog   177 LDVYSNKDES-VELFQHVSLMTLDSIMKCAFSYHSNCQTDKDNDYIQAVYDLSWLTQQRIRTFPY 240

  Fly   233 WSDTLFKMFAEK-DYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFTSKKRFAMLD 296
            .|:.::.:.... .:..|..:||..:.::|.:|:..|..:         .|.|....|:....||
 Frog   241 HSNLIYFLSPHGFRFRKACRIVHLHTDKVIGQRKKLLESK---------EELEKVQKKRHLDFLD 296

  Fly   297 TLILAEKD----GLIDHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANID 357
             ::|..||    || .|..:..||||.||||:||||.|:.:.|..|:.:||.|:||.:||...: 
 Frog   297 -ILLCSKDENGQGL-SHEDLRAEVDTFMFEGHDTTSSGISWILYCMATHPEHQQKCREEISEAL- 358

  Fly   358 DELNILNIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHR 422
            .|...:....||::......|||::||:|.||::.||..:.....:|..||.|..:.:.::.|||
 Frog   359 GERQTMEWDDLNRMPYTTMCIKESLRLYPPVPSVSRELAKPITFHDGRSLPAGMLVSLQIYAIHR 423

  Fly   423 NPEYWDSPEEFRPERFLPENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPE 487
            ||..|..||.|.|.||.||||..||::|::||:||.||||||.|||.|||..:...||:|::.|:
 Frog   424 NPNVWKDPEIFDPLRFSPENSSKRHSHAFVPFAAGPRNCIGQNFAMNEMKVAVALTLKRFELSPD 488

  Fly   488 IDPKTIVFQTGLTLRTKNQIHVKL 511
            :. |..:.|..|.||:||.|||.|
 Frog   489 LS-KPPLKQPQLVLRSKNGIHVYL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 145/461 (31%)
cyp4b1.2NP_001017348.1 p450 55..508 CDD:278495 149/497 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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