DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p3 and Cyp4f17

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001178915.1 Gene:Cyp4f17 / 500801 RGDID:1561655 Length:524 Species:Rattus norvegicus


Alignment Length:535 Identity:161/535 - (30%)
Similarity:253/535 - (47%) Gaps:71/535 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILWLVGAFIVL---IQWIYRLNRDYCIL----------GFFAKRIRTKNGQNPESIAPLVKGSTI 54
            :|.:||..::|   :.||.....:||.|          .|:......||  |.|.:..|.:.|..
  Rat    21 LLLVVGTSLLLARILAWISAFYDNYCRLRCFPQPPSRHWFWGHLNLVKN--NEEGLQLLAEMSHQ 83

  Fly    55 FANSFDLYGKDHSGVFEHSRDCAKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLI--NKGTI 117
            |.:....:    .|:|                    ..|..:|.......:|..|..:  .:...
  Rat    84 FQDIHLCW----IGIF--------------------YPILRLIHPKFIGPILQAPAAVAPKEMIF 124

  Fly   118 YDFLHPFLRTGLLTSTGKKWHARRKMLSPTFHFNILNQFQEIFITESLKFL----EQFKGNDEAI 178
            |.||.|:|..|||.|.|:||..:|::|:|.|||:||..:.:.| .:|:..:    ::......|.
  Rat   125 YGFLKPWLGDGLLVSAGEKWSRQRRLLTPAFHFDILKPYVKNF-NKSVNIMHAKWQRLTAKGSAR 188

  Fly   179 ISLNEVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLLWSDTLFKMFAE 243
            :.:.|.|...||:|:.:...... ....|....|....:::....::|...|.|:.|.|:.:.|:
  Rat   189 LDMFEHISLMTLDSLQKCVFSFD-SNCQESPSEYIAAIQELSSLIVKRHHQPFLYMDFLYYLTAD 252

  Fly   244 -KDYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFTSK---KRFAMLDTLILAEKD 304
             :.:..|.|:||.|:..:|.:||..|:.:         :.||...||   |....:|.|:||:.:
  Rat   253 GRRFRKACDLVHNFTDAVIRERRRTLSSQ---------SVDEFLKSKTKSKTLDFIDVLLLAKDE 308

  Fly   305 ---GLIDHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANI-DDELNILNI 365
               .|.|. .|..|.||.||.|:|||:..|.:.|.|::.:||.||:|.||::..: |.|...:..
  Rat   309 HGKELSDE-DIRAEADTFMFGGHDTTASALSWILYNLARHPEHQERCRQEVRELLRDREPEEIEW 372

  Fly   366 GQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSP 430
            ..|.:|..|...|||::||.|.|..:.|..|::..|.:|.::|||:...:.:|.:|.||..|..|
  Rat   373 DDLTQLPFLTMCIKESLRLHPPVTVISRCCTQDVVLPDGRVIPKGNDCIISIFGVHHNPSVWPDP 437

  Fly   431 EEFRPERFLPENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPE-----IDP 490
            |.:.|.||..||.|.|...|:||||||.||||||.|||.|||..:...|.:|::||:     ..|
  Rat   438 EVYDPFRFDSENPQKRSPLAFIPFSAGPRNCIGQTFAMNEMKVAVALTLLRFRLLPDDKEPRRKP 502

  Fly   491 KTIV-FQTGLTLRTK 504
            :.|: .:.||.||.:
  Rat   503 ELILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 145/471 (31%)
Cyp4f17NP_001178915.1 p450 52..514 CDD:278495 150/499 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348711
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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