DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p3 and Cyp4f18

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001028858.2 Gene:Cyp4f18 / 290623 RGDID:1305261 Length:524 Species:Rattus norvegicus


Alignment Length:537 Identity:161/537 - (29%)
Similarity:253/537 - (47%) Gaps:73/537 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LILWLVGAFIVLIQWIYRLNRDYCILGFFAKRIR------TKNGQNPESIAPLVKGSTIFANSFD 60
            |:|.||||..:|   .|.|.:.|.:.. .::|:|      |:|.                     
  Rat    20 LLLLLVGASCLL---AYILPQVYAVFE-NSRRLRRFPQPPTRNW--------------------- 59

  Fly    61 LYGKDHSGVFEHSRD---CAKKLGKSYAE---YAMGT--AIYNVIDADSAERVLNDPNLI--NKG 115
            |:|  |.|:.:.|.:   ..:.|.:::.:   :.:|.  .:..:......:.|:..|..:  ...
  Rat    60 LFG--HLGLIQSSEEGLLYIQSLSRTFRDVCCWWVGPWHPVIRIFHPAFIKPVILAPASVAPKDR 122

  Fly   116 TIYDFLHPFLRTGLLTSTGKKWHARRKMLSPTFHFNILNQFQEIFITESLKFL----EQFKGNDE 176
            ..|.||.|:|..|||.|||.||...|.||:|.||||||..:.:|| .:|...:    ::......
  Rat   123 VFYRFLKPWLGDGLLLSTGDKWSRHRHMLTPAFHFNILKPYVKIF-NDSTNIMHAKWQRLASQGS 186

  Fly   177 AIISLNEVIPRFTLNSICETAMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLLWSDTLFKMF 241
            |.:.:.|.|...||:|:.:...... ....||...|.....::.....||..:.||:.|..:.:.
  Rat   187 ARLDMFEHISLMTLDSLQKCVFSFD-SNCQEKPSEYITAILELSALVARRHQSLLLYVDLFYHLT 250

  Fly   242 AE-KDYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFTSK---KRFAMLDTLILAE 302
            .: ..:..|..:||.|:..:|.:||..|.|:         ..|:...:|   |....:|.|:|::
  Rat   251 RDGMRFRKACRLVHDFTDAVIRERRRTLPDQ---------GGDDALKAKAKAKTLDFIDVLLLSK 306

  Fly   303 K---DGLIDHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANI-DDELNIL 363
            .   :.|.|. .|..|.||.||.|:|||:.||.:.|.|::.:||.||:|.||::..: |.|...:
  Rat   307 DEHGEALSDE-DIRAEADTFMFGGHDTTASGLSWILYNLAKHPEYQERCRQEVRELLRDREPEEI 370

  Fly   364 NIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWD 428
            ....|.:|..|...|||::||.|...|:.|..|::..|.:|.::|||....:.:|..|.||..|.
  Rat   371 EWDDLAQLPFLTMCIKESLRLHPPATAISRCCTQDIMLPDGRVIPKGVICRISIFGTHHNPAVWP 435

  Fly   429 SPEEFRPERFLPENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPE-----I 488
            .||.:.|.||..:|.:.|...|:||||||.||||||.|||.|||..:...|.:|::||:     .
  Rat   436 DPEVYNPFRFDADNGEGRSPLAFIPFSAGPRNCIGQTFAMSEMKVALALTLLRFRVLPDDKEPRR 500

  Fly   489 DPKTIV-FQTGLTLRTK 504
            .|:.|: .:.||.||.:
  Rat   501 KPELILRAEGGLWLRVE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 147/479 (31%)
Cyp4f18NP_001028858.2 CYP4F 74..515 CDD:410772 140/452 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166348750
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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