DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p3 and cyp-13A1

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001369869.1 Gene:cyp-13A1 / 188361 WormBaseID:WBGene00011677 Length:519 Species:Caenorhabditis elegans


Alignment Length:576 Identity:138/576 - (23%)
Similarity:222/576 - (38%) Gaps:146/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLVGAFIVLI-----QWIYRLNR------DYCILGFFAKRIRTKNGQNPESIAPLVKGSTIFANS 58
            |....|:.:.     ||.:...|      .:.:||                         :|.||
 Worm     8 WFSAIFVAVFSYYIWQWTFWRRRGVVGPMGFPVLG-------------------------VFLNS 47

  Fly    59 FDLYGKDHSGVFE-HSRDCAKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLINK--GTIYDF 120
            .     |::..|. ..|:..||.||          ||...:......|::||.|:::  .|.||.
 Worm    48 L-----DNNFPFPLQCREWTKKFGK----------IYGFTEGTLKTLVISDPELVHEVFVTQYDN 97

  Fly   121 LH-----PF-------LRTGLLTSTGKKWHARRKMLSPTFHFNILNQFQEIFITESLKFL----E 169
            .:     |.       .||.|..:.|.:|...|.:.||||..:.|.:..:.....:|:.|    :
 Worm    98 FYGRKRNPIQGDSEKEKRTNLFAAQGFRWKRLRAISSPTFSNSSLRKLYQTVEDSALELLRHIEK 162

  Fly   170 QFKGNDEAIISLNEVIPRFTLNSICETAMGVKLDEMAEK------GDRYRENFRQ------IEEC 222
            |..|..:  |.:.:....|||:.|...|||....:|.:.      ...::.||.:      |...
 Worm   163 QSAGGKQ--IDMLKFYQEFTLDVIGRIAMGQTDSQMFKNPIMPIVSKLFQGNFAKLFLIGGIFPT 225

  Fly   223 FIRRMSNPLLWSDTLFKMFAEKDYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFT 287
            |:..:...:|..:.....| .|.....||.:|.     ..|:|::     |.:...:..|...|.
 Worm   226 FLVEIIRQILLKNLKVGSF-RKINEITLDAIHN-----RIKQREE-----DQKNGIEIGEPADFI 279

  Fly   288 SKKRFAMLDTLILAEKDGLIDHIG---------------------ICEEVDTLMFEGYDTTSIGL 331
            .         |.|..|...::|.|                     |..:....:..|:|||::.|
 Worm   280 D---------LFLDAKAEDVEHFGENNGDFSKSTTYTNRQLTTEEIVGQCTVFLIAGFDTTALSL 335

  Fly   332 MFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLKNLEYFIKETMRLFP-SVPAMGRET 395
            .:....::.:||.|:|..:|:.....:.  .:.|.||:|||.:|...||.:||:| ...|..|..
 Worm   336 SYATYLLATHPEIQKKLQEEVNRECPNP--EVTIDQLSKLKYMECVFKEALRLYPLGAFANSRRC 398

  Fly   396 TRETELSNGLILPKGSQIFVHVFDIHRNPEYW-DSPEEFRPERF-LPENSQNRHTYAYIPFSAGQ 458
            .|.|:|.| :.:..|:.|.|..:.:|.:|..| |..|:|:|||: .|.:.|......||||..|.
 Worm   399 MRNTKLGN-MKVEVGTMIQVDTWTLHTDPNIWGDDAEDFKPERWQTPNSDQIYQKSGYIPFGLGP 462

  Fly   459 RNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTIVFQTGLTLRTKNQIHVKLVRR 514
            |.|||.:.|..|.|.|:|.:|::|           .|:||    .|.:|.:||:.|
 Worm   463 RQCIGMRLAYMEEKILLVHILRKF-----------TFETG----AKTEIPLKLIGR 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 126/505 (25%)
cyp-13A1NP_001369869.1 CYP3A-like 64..510 CDD:410678 124/490 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.