DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p3 and cyp-29A2

DIOPT Version :10

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_505847.1 Gene:cyp-29A2 / 179550 WormBaseID:WBGene00011830 Length:503 Species:Caenorhabditis elegans


Alignment Length:521 Identity:163/521 - (31%)
Similarity:241/521 - (46%) Gaps:62/521 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ILGFFAKRIRT----KNGQNPESIAPLVKGSTIFANSFDLYGK---DHSGVF----------EHS 73
            ||.:.|..|.|    |......|..|......||.|...:.||   |...||          .||
 Worm    12 ILAYLATWIPTLLKYKRHWQYGSKLPGPPAHPIFGNLGPIVGKKTEDLPSVFINWAAEQRDQGHS 76

  Fly    74 RDCAKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLINKGTIYDFLHPFLRTG-LLTSTGKKW 137
            ......|||.||....|.|...:||:.:.         .|||..|.|..|:|..| ||...|::|
 Worm    77 VMRVMILGKVYAWPLNGKAAAAIIDSTTE---------TNKGDDYRFFDPWLGGGLLLEGYGERW 132

  Fly   138 HARRKMLSPTFHFNILNQFQEIFITES---LKFLEQFKGNDEAIISLNEVIP---RFTLNSICET 196
            .:.||||:|.|||..|..:.|:|..||   :..|..|..:.|.:    ::.|   |..|:.|.||
 Worm   133 KSHRKMLTPAFHFAKLGGYFEVFNNESKILIDLLSDFSASGETV----DIFPYVKRCALDIISET 193

  Fly   197 AMGVKLDEMAEKGDRYRENFRQIEECFIRRMSNPLLWSDTLFKMFAEK----DYASALDVVHGFS 257
            |||:|:|.......:|.:......:..:....||.|.:..:|.....|    ||.|.|..:    
 Worm   194 AMGIKIDAQINHDHKYVQAVEGYNKIGVLVSFNPHLKNQFIFWATGYKAQYDDYLSTLKSM---- 254

  Fly   258 SEIIAKRRDQLNDEIDSRGNTQTAEDELFTSKKRFAMLDTLILAEKDGLIDHIGICEEVDTLMFE 322
            :|.:.|.|...:|         :.|.|..|||:....||.::..|:...:....|.:||||.||.
 Worm   255 TEKVIKERRAAHD---------SGEVEKETSKRMMNFLDLMLSMEESNQLTSEDIRQEVDTFMFA 310

  Fly   323 GYDTTSIGLMFGLMNMSLYPEEQEKCYQE-IQANIDDELNILNIGQLNKLKNLEYFIKETMRLFP 386
            |:|||:....:...|::..|..|||.|:| |:...||....:.:..:|.|..|:..:||:.|:..
 Worm   311 GHDTTTSSTSWACWNLAHNPNVQEKVYKEMIEVFGDDPNTDITLENVNNLNYLDIVLKESKRIIA 375

  Fly   387 SVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSPEEFRPERFLPENSQNRHTYAY 451
            .|||:.|:.|.:.|: :|.|:|.|..:.:....:|.|...:.:|.||.|:||||:....||.|.:
 Worm   376 PVPALQRKLTNDLEI-DGYIVPAGGNVTISPMVLHSNHHVFKNPTEFNPDRFLPDEVSKRHPYDF 439

  Fly   452 IPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEI---DPKTIVFQTGLTLRTKNQIHVKLVR 513
            :||.||.|||||||||....|.::..:::.|:|.|.:   |.|..:   .:..:..|.|.|:|:|
 Worm   440 MPFLAGPRNCIGQKFAQLNEKVMISHIVRNFKIEPTLKYNDTKPCL---EVVTKPSNGIPVRLIR 501

  Fly   514 R 514
            |
 Worm   502 R 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 CYP4 81..509 CDD:410721 140/442 (32%)
cyp-29A2NP_505847.1 CYP4 75..497 CDD:410721 143/451 (32%)

Return to query results.
Submit another query.