DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p3 and Cyp3a62

DIOPT Version :9

Sequence 1:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:544 Identity:134/544 - (24%)
Similarity:244/544 - (44%) Gaps:108/544 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLVGAFIVLIQWIY--RLNRDYCILGFFAKRIRTKNGQNPESIAPLVKGSTIFANSFDLYGKDHS 67
            |::.|.|:::.::|  ..:.::..||.        :|..|   .|.|.....:.:.|        
  Rat    12 WMLLATILVLLYLYGTSTHGNFKKLGI--------SGPKP---LPFVGNILAYRHGF-------- 57

  Fly    68 GVFEHSRDCAKKLGKSYAEYAMGTAIYNVIDADSAERVLNDPNLINKGTIYDFLHPF-------- 124
              :|..|.|.||.|..:..|.....|.          .:.||::|....:.:....|        
  Rat    58 --WEFDRHCHKKYGDIWGFYEGRQPIL----------AITDPDIIKTVLVKECYSTFTNRRSFGP 110

  Fly   125 ---LRTGLLTSTGKKWHARRKMLSPTF-------HFNILNQFQEIFITESLKFLEQFKGNDEAII 179
               |:..:..|..::|...|.:|||||       .|.|:||:.::.: :::|. |..|||.   |
  Rat   111 AGILKKAITLSEDEEWKRLRTLLSPTFTSGKLKEMFPIINQYADLLV-KNVKH-EAEKGNP---I 170

  Fly   180 SLNEVIPRFTLNSICETAMGVKLDEMAEKGDRYRE------NFRQIEECFIRRMSNPLLWSDTLF 238
            ::.::...::::.|..|:.||.:|.:....:.:.:      .|..::..|:..:..|.|  ..:|
  Rat   171 TMKDIFGAYSMDVITGTSFGVNVDSLNNPQNPFVQKVKKLLKFNFLDPFFLSVILFPFL--TPVF 233

  Fly   239 KMFAEKDYASALDVVHGFSSEIIAKRRDQLNDEIDSRGNTQTAEDELFTSKKRFAMLDTLILAEK 303
            :.|....:..  ||:..|.:.:...:.:::.:::                |:|...|..:|.::.
  Rat   234 EAFDITVFPK--DVMKFFRTSVERMKENRMQEKV----------------KQRLDFLQLMINSQS 280

  Fly   304 -------DGLIDHIGICEEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELN 361
                   .||.| :.|..:....:|.||:|||..|.|.|..::.:|:.|:|...||.|.:.::..
  Rat   281 SGDKESHQGLTD-VEIVAQSIFFIFAGYETTSSALSFALYLLATHPDLQKKLQDEIDAALPNKAP 344

  Fly   362 ILNIGQLNKLKNLEYFIKETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEY 426
            : ....|.:::.|:..:.||:||||....:.|...::.|: ||:.:|||:.:.|..|.:|::|:.
  Rat   345 V-TYDVLVEMEYLDMVLNETLRLFPVGGRLERVCKKDVEI-NGVFIPKGTVVMVPTFALHKDPKC 407

  Fly   427 WDSPEEFRPERFLPENSQNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPK 491
            |..||||.||||..:|..:.:.|.|:||..|.|||||.:||:..||..:|.:|:.|..       
  Rat   408 WPEPEEFCPERFRKKNQDSINPYIYLPFGNGPRNCIGMRFALMNMKIALVRVLQNFSF------- 465

  Fly   492 TIVFQTGLTLRTKNQIHVKLVRRK 515
                  ||...|  ||.:|| |:|
  Rat   466 ------GLCKET--QIPLKL-RKK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 118/481 (25%)
Cyp3a62NP_001019403.1 p450 39..491 CDD:278495 128/509 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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