DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp46a1.3

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001027517.1 Gene:cyp46a1.3 / 613109 XenbaseID:XB-GENE-969052 Length:504 Species:Xenopus tropicalis


Alignment Length:555 Identity:122/555 - (21%)
Similarity:229/555 - (41%) Gaps:110/555 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MICLLWISVAILVVIHWIYKVNKDYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCFDLLGK 66
            ::.|..|.:..|:...:|:.::..|:.:          .|.|.||.               .||.
 Frog    12 LLLLALILICFLLFSGYIHYIHMKYDHI----------PGPPRDSF---------------FLGH 51

  Fly    67 DTDQVFTHLRQLAKNS---GDSYLQYSMGFSNFNVIDA-HNAANILNHPNLITK----------- 116
            ..    |.|| |.||:   .|.:|.:...:.....|:. |....::..|..:.:           
 Frog    52 SP----TMLR-LMKNNLLMYDHFLGWVQKYGPVVRINGLHRVIILVVSPEAVKELLMSPKYSKDK 111

  Fly   117 --GVIYN-FLHPFLRTGVLTATE-KKWHTRRSML----TRTFHLDILNQFQEIFIAESL--KFVS 171
              .||.| |...|:..|::|..: ..||.:|.::    :||:.:.::..|.|  .||.|  |.:.
 Frog   112 FYDVIANMFGVRFMGKGLVTDRDYDHWHKQRRIMDPAFSRTYLMGLMGPFNE--KAEELMEKLME 174

  Fly   172 QFQGQNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYWD 236
            :..|:.|  :.:.|.:||.||:.|.:.|.|::|:.:.:....:.....::.:|:. .:.||:...
 Frog   175 KADGKCE--IKMHDMLSRLTLDVIGKVAFGMELNSLNDDLTPFPKAISLVMKGIV-EMRNPMVRY 236

  Fly   237 DCVYNMFTGHKYNAALKVVHEFSREIIAKRRV-----------LLEEELENRRATQTADDDICVI 290
            ......|. .|...:::::.:..:|.|.:|:.           :|.:.|:.....:..|.:|   
 Frog   237 SLAKRGFI-RKVQESIRLLRQTGKECIERRQKQIQDGEEIPVDILTQILKGAAMEEECDPEI--- 297

  Fly   291 RKKRFAMLDTLICAEKDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEI 355
                  :||..:                  |....|.:||:..|.|.:|.:.......|....||
 Frog   298 ------LLDNFV------------------TFFIAGQETTANQLSFVVMELGRNPEILEKAQAEI 338

  Fly   356 QEHILDDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHV 420
            .| ::....::....|.||.||...:|||:||||:.|...| .|.|..:.:|:.:|:...|.::.
 Frog   339 DE-VIGSKRDIEYEDLGKLQYLSQVLKETLRLYPTAPGTSR-GLTEDMVIDGVKVPENVTIMLNS 401

  Fly   421 FDIHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHF 485
            :.:.|..:|:..|..|.|:||.|.  ..:..|:|.|||.|.|:||||.::..|.|.:|..:|:.:
 Frog   402 YIMGRMEQYYSDPLTFNPDRFSPD--APKPYYSYFPFSLGPRSCIGQVFSQMEAKVVMAKLLQRY 464

  Fly   486 KI-------LPVIDPKSIVFQVGITLRFKNKIKVK 513
            :.       ..::|..::....|:..|.:.:...|
 Frog   465 EFELAEGQSFKILDTGTLRPLDGVICRLRPRTSKK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 113/494 (23%)
cyp46a1.3NP_001027517.1 p450 40..491 CDD:306555 115/507 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.