DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p2 and cyp3c4

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001071016.1 Gene:cyp3c4 / 558541 ZFINID:ZDB-GENE-060929-96 Length:507 Species:Danio rerio


Alignment Length:566 Identity:141/566 - (24%)
Similarity:247/566 - (43%) Gaps:118/566 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ICLLWISVAILVVIHWIYKVNKDYNILAFFARRVQTKDGKP-------LDSLVPMIKGRTVFANC 60
            :.:.|..|.:::.:.:||.|         :..|...|.|.|       :.:|:...||   ..| 
Zfish     7 LSVTWTLVVLVITLLFIYGV---------WPHRFFIKLGIPGPRPWPFVGTLLSYAKG---LCN- 58

  Fly    61 FDLLGKDTDQVFTHLRQLAKNSG------DSYLQYSMGFSNFNVIDAHNAANILNHPNLITKGVI 119
            ||:             :.||..|      |..|...| .::..||..           ::.|...
Zfish    59 FDM-------------ECAKKYGKVWGIYDGRLPILM-VADLEVIKV-----------VLVKECY 98

  Fly   120 YNFLHPFLRT---------GVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQFQG 175
            .||::...||         |::...:::|...||.|:..|....|.:...|.:..:.:|:...|.
Zfish    99 SNFINRRKRTTGLAGPFSDGIIMVKDERWKRMRSTLSPYFTSGRLKEIFPIAMTHADRFIKNMQK 163

  Fly   176 QN-EVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPL------ 233
            :: |..|.:|:.::.::|:.|..::..:.:|.:....|.:..|   :.:.:...:.|||      
Zfish   164 KDPEQPVKIKEVVAPYSLDVITSSSFSVDIDSINNPEDPFVIN---VKKFIQFNMFNPLLLLILL 225

  Fly   234 --------------YWDDCVYNMFTGHKYNAALKVVHEFSREIIAKRRV-LLEEELENRRATQTA 283
                          .:.....:.|    |:...|:..:.::|  ::.|| .|:..|:|    |..
Zfish   226 FPSLAIPLKKMGVTLFSKSAMDFF----YSVLKKIKDDHNKE--SEGRVDFLKLMLQN----QIP 280

  Fly   284 DDDICVIRKKRFAMLDTLICAEKDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQ 348
            ||.|        ...||.....| ||.|...:|:.:..::. ||:|||..|.|.|.|:    |..
Zfish   281 DDQI--------QDSDTSEQPAK-GLTDHEILSQSLVFILG-GYETTSTTLTFLLYNL----ATN 331

  Fly   349 ELCYQEIQEHI-----LDDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGL 408
            ..|.:::.|.|     ||  :.:....|.:::||...|.|:|||.|:.|.:.| :.::|.:.|||
Zfish   332 PDCLEKLVEEIDKNFPLD--TPITYDALMRMDYLEMAINESMRLLPTAPRLER-SAKKTVVINGL 393

  Fly   409 ILPKRSQINIHVFDIHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQE 473
            .:|:.:.:.|..:.:..:|..||||.|||||||.|:|..:...||:|||..|.|||||.:||:..
Zfish   394 TIPEGTLVGIPTYVLSHDPDIWESPGEFRPERFSPENKSEFLQYAFIPFGLGPRNCIGMRYAVMI 458

  Fly   474 MKTLMVVILKHFKILPVIDPKSIVFQVGITLRFKNKIKVKLVRRNC 519
            ||..:|.:|::|.: .......|..::.:|.:.|..|.:||:.|:|
Zfish   459 MKLFVVKLLQNFSV-ETCKETQIPLEMNVTFQPKVPITLKLIPRSC 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 122/492 (25%)
cyp3c4NP_001071016.1 p450 38..485 CDD:278495 126/506 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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