DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp4f2

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001016020.1 Gene:cyp4f2 / 548774 XenbaseID:XB-GENE-6258041 Length:528 Species:Xenopus tropicalis


Alignment Length:552 Identity:151/552 - (27%)
Similarity:269/552 - (48%) Gaps:87/552 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMICLLWISVAILVVIH-WIYKVNKDYNILAFFARRVQTKDGKP--------LDSLVPMIKGRTV 56
            :|.||:.......:.|: :.|.:|         |||::.....|        |...:|..:|.|.
 Frog    29 LMFCLIMCRTIFKMAIYIYAYIIN---------ARRLRCFPEPPRRSWLLGHLGMFMPTEEGLTE 84

  Fly    57 FANCFDLLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFSNFNVIDAHNAANILNHPNLITKGVI-- 119
            .::....|.:   .:.|.|..:.:.|                         |.||:.: |.|:  
 Frog    85 ISSAICNLRR---TLLTWLGPIPEVS-------------------------LVHPDTV-KPVVAA 120

  Fly   120 -----------YNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQF 173
                       |.||.|:|..|:|.:..:||...|.:||..||.|||..:.:||...:...::::
 Frog   121 SAAIAPKDELFYGFLRPWLGDGLLLSRGEKWGQHRRLLTPAFHFDILKNYVKIFNQSTDIMLAKW 185

  Fly   174 Q---GQNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYW 235
            :   .:..|.:.:.:.:|..||:::.:.......|...:..|...|.:.:....:.|....|.::
 Frog   186 RRLTAEGPVSLDMFEHVSLMTLDTLLKCTFSYDSDCQEKPSDYISAIYELSSLVVKREHYLPHHF 250

  Fly   236 DDCVYNMFT-GHKYNAALKVVHEFSREIIAKRRVLLEEE-----LENRRATQTADDDICVIRKKR 294
             |.:||:.: |.|:..|.|.||||:..::.:|:..|:|:     :::::.......||.::.|. 
 Frog   251 -DFIYNLSSNGRKFRQACKTVHEFTAGVVQQRKKALQEKGMEEWIKSKQGKTKDFIDILLLSKN- 313

  Fly   295 FAMLDTLICAEKDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHI 359
                      |....:.|..:..||||.|.||:|||:.||.:.|.|::.:...||.|.:||.| :
 Frog   314 ----------EDGSQLSDEDMRAEVDTFMFEGHDTTASGLSWILYNLACHPEYQEKCRKEITE-L 367

  Fly   360 LD--DLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFD 422
            |:  |:.:|...:||||.:....|||::||:|.:..:.|:..::.:|..|.||||.:...|::|.
 Frog   368 LEGKDIKHLEWDELSKLPFTTMCIKESLRLHPPVVAVIRRCTEDIKLPKGDILPKGNCCIINIFG 432

  Fly   423 IHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKI 487
            ||.||..|.:|:.:.|.||.|:|..:|..||::|||||.||||||.:||.|||.::.:||.:|::
 Frog   433 IHHNPDVWPNPQVYDPYRFDPENLQERSSYAFVPFSAGPRNCIGQNFAMAEMKIVLALILYNFQV 497

  Fly   488 LPVIDPKSIVFQVGITLRFKNK--IKVKLVRR 517
             .:.:.|::..:..:.||.:|.  ::|:.::|
 Frog   498 -RLDETKTVRRKPELILRAENGLWLQVEELKR 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 136/476 (29%)
cyp4f2NP_001016020.1 p450 60..513 CDD:278495 137/495 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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