DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp-25A3

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001040850.1 Gene:cyp-25A3 / 4363046 WormBaseID:WBGene00014697 Length:502 Species:Caenorhabditis elegans


Alignment Length:563 Identity:131/563 - (23%)
Similarity:226/563 - (40%) Gaps:107/563 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MICLLWISVAILVVIHWIYKVNKDYNILAFFAR-RVQTKDG----KP---LDSLVPMI--KGRTV 56
            |..|:..|:.:.:|...||.      |||...| |::.|.|    :|   :.:|..:|  |.:..
 Worm     1 MAFLILTSILVSLVSFIIYV------ILARKERFRLRGKIGLSGPEPHWLMGNLKQIIERKAKLG 59

  Fly    57 FANCFDLLGK------DTDQVF--THLRQLAKNSGDSYLQYSMGFSNFN------VIDAHNAANI 107
            :.:.:|...|      :|..::  |.|.....|..|....:...||||:      :|:       
 Worm    60 YDDSYDWYNKLHKQFGETFGIYFGTQLNINITNEEDIKEVFIKNFSNFSDRTPPPIIE------- 117

  Fly   108 LNHPNLITKGVIYN-----------FLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEI 161
               .|.:.:.::.|           .:.|...||.:.|..:..|::..:.     |:||.  ::.
 Worm   118 ---DNKLKESLLQNTYESGWKHTRSAIAPIFSTGKMKAMHETIHSKVDLF-----LEILK--EKA 172

  Fly   162 FIAESLKFVSQFQGQNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLT 226
            ...:.......|||              .||:.|.:.|..|..:...::.|.:..|        .
 Worm   173 SSGQKWDIYDDFQG--------------LTLDVIGKCAFAIDSNCQRDRNDVFYVN--------A 215

  Fly   227 RRIVN--PLYWDDCVYNMFTGHKYNAALKVVHEFSREIIAKRRVLLEEEL----ENRRATQTADD 285
            |:.:.  .:.....:...|...:.:...||::.|:.  :||..:.|.|.|    |.||..:.:|.
 Worm   216 RKFITNIDIRHSKIISTSFLFPELSKLWKVLYRFTD--LAKAEIPLVEGLADVYERRRGGEGSDS 278

  Fly   286 DICVIRKKRFAMLDTLICAEKDGL--IDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQ 348
                     ..:|..|:..|.|..  :....:.|.....:..||:|||..:.:....:|.|...|
 Worm   279 ---------VDLLKLLLNREDDKSKPMTKQEVIENCFAFLLAGYETTSTAMTYCSYLLSKYPNVQ 334

  Fly   349 ELCYQEIQEHILDDLSNLNLSQLSKLNYLGYFIKETMRLYPS-IPIMGRQTLQETELENGLILPK 412
            :..|:||.|  ..:...|....:..:.||.|..|||:|.||. |....|:.|::..: .|...||
 Worm   335 QKLYEEIME--AKENGGLTYDSIHNMKYLDYVYKETLRCYPPVIHFSNRRCLKDITI-RGQFYPK 396

  Fly   413 RSQINIHVFDIHRNPKYWESPEEFRPERFLPQNC-LKRHPYAYIPFSAGQRNCIGQKYAMQEMKT 476
            .:.:......:||||:.|:|||||.||||  :|. .|.....:|||..|.|.|:|.::|..|.||
 Worm   397 GAIVVCLPHTVHRNPENWDSPEEFHPERF--ENWEEKSSSLKWIPFGVGPRYCVGMRFAEMEFKT 459

  Fly   477 LMVVILKHFKILPVIDPKSIVFQV-GITLRFKNKIKVKLVRRN 518
            .:..:|..|::........::... |:.:|.|:.:::.|..||
 Worm   460 TIAKLLDTFELKQFEGEADLIPDCNGVIMRPKDPVRLHLKPRN 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 110/486 (23%)
cyp-25A3NP_001040850.1 p450 37..496 CDD:278495 115/513 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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