DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and Cyp4a12a

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_803125.2 Gene:Cyp4a12a / 277753 MGIID:88612 Length:508 Species:Mus musculus


Alignment Length:470 Identity:141/470 - (30%)
Similarity:234/470 - (49%) Gaps:48/470 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFS-NFNVIDAHNAANILNHPNLITKGVIYNFLHPF 126
            |..:|...:.|.:    ||...:..|:..|.. ...|.|......||...:....| .|.||.|:
Mouse    65 LKDQDLQDILTRI----KNFPSACPQWLWGSKVRIQVYDPDYMKLILGRSDPKANG-SYRFLAPW 124

  Fly   127 LRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFV----SQFQGQNEVVVSLKDRI 187
            :..|:|....:.|...|.|||..||.|||..:.|| :|:|::.:    .|..||:..:...: .|
Mouse   125 IGRGLLMLDGQTWFQHRRMLTPAFHYDILKPYTEI-MADSVRVMLDKWEQIVGQDSTLEIFR-HI 187

  Fly   188 SRFTLNSICETAM----GIKLDEMAEKGDRYRANFHIID---EGLTRRIVNPLYWDDCVYNMFT- 244
            :..||::|.:.|.    .::||.      :|::....::   :.:..|:.|..:.:|.:|.:.: 
Mouse   188 TLMTLDTIMKCAFSHEGSVQLDR------KYKSYIQAVEDLNDLVFSRVRNIFHQNDIIYRVSSN 246

  Fly   245 GHKYNAALKVVHEFSREIIAKRRVLL--EEELENRRATQTADDDICVIRKKRFAMLDTLICA--E 305
            |.|.|:|.|:.|:.:.::|..||:.|  |||||..:            :|:|...||.|:.|  |
Mouse   247 GCKANSACKLAHDHTDQVIKSRRIQLQDEEELEKLK------------KKRRLDFLDILLFARME 299

  Fly   306 KDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDLSNLNLSQ 370
            ....:.|..:..||||.|.||:|||:.|:.:....::.....|:.|.:|||. :|.|.:::..:.
Mouse   300 NGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQS-LLGDGTSITWND 363

  Fly   371 LSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHRNPKYWESPEE 435
            |.|:.|....|||.:|:||.:|.:.|:........:|..|||...:.:..:.:|.||..|.:||.
Mouse   364 LDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEV 428

  Fly   436 FRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKILPVIDPKSIVFQV 500
            |.|.||.|.:  .||.::::|||.|.|||||:::||.|:|..:.:.|..|::||  ||..:...:
Mouse   429 FDPSRFAPGS--SRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP--DPTRVPIPI 489

  Fly   501 -GITLRFKNKIKVKL 514
             .|.|:.||.|.:.|
Mouse   490 PRIVLKSKNGIHLHL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 140/468 (30%)
Cyp4a12aNP_803125.2 p450 52..502 CDD:278495 140/466 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845077
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.