DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p2 and Cyp3a18

DIOPT Version :10

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_665725.2 Gene:Cyp3a18 / 252931 RGDID:628709 Length:497 Species:Rattus norvegicus


Alignment Length:555 Identity:123/555 - (22%)
Similarity:235/555 - (42%) Gaps:112/555 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WISVAILVVIHWIYKVNKDYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCFDLLGKDTDQV 71
            |:.:|..:::.:||         ..::..:..|.|.|....||:.  .|:| |..|.:.|..|  
  Rat    12 WVLLATSLMLFYIY---------GTYSHGLFKKLGIPGPKPVPLF--GTIF-NYGDGMWKFDD-- 62

  Fly    72 FTHLRQLAKNSGDSYLQYS--MGFSN-----FNVIDAHNAANILNHPNLITKGVIYNFLHP---- 125
                        |.|.:|.  .||..     ..::|          |.:| |.|:....:.    
  Rat    63 ------------DCYKKYGKIWGFYEGPQPFLAIMD----------PEII-KMVLVKECYSVFTN 104

  Fly   126 --------FLRTGVLTATEKKWHTRRSMLTRTF-------HLDILNQFQEIFIAESLKFVSQFQG 175
                    |::..:..:.:::|...|::|:.||       ...::.|:.:..    ||.:.:.:.
  Rat   105 RRCFGPMGFMKKAITMSEDEEWKRLRTILSPTFTSGKLKEMFPLMRQYGDTL----LKNLRREEA 165

  Fly   176 QNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRY--RA----NFHIIDEGLTRRI----V 230
            :.| .:::||....::::.|..|:.|:.:|.:....|.:  :|    .|.|.|..|...:    :
  Rat   166 KGE-PINMKDIFGAYSMDVITGTSFGVNVDSLNNPQDPFVQKAKKILKFQIFDPFLLSVVLFPFL 229

  Fly   231 NPLYWDDCVYNMFTGHKYNAALKVVHEFSREIIAKRRVLLEEELENRRATQTADDDICVIRKKRF 295
            .|:| :...:::|.....|...|.|....:..:...:....:.|:....||.:...         
  Rat   230 TPIY-EMLNFSIFPRQSMNFFKKFVKTMKKNRLDSNQKSRVDFLQLMMNTQNSKGQ--------- 284

  Fly   296 AMLDTLICAEKDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHIL 360
                     |....:.|:.::.:....:..|||.||..:.|.:..::.....|:....|| :..|
  Rat   285 ---------ESQKALSDLEMAAQAIIFIFGGYDATSTSISFIMYELATRPNVQKKLQNEI-DRAL 339

  Fly   361 DDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHR 425
            .:.:.:....|.::.||...:.|::||||....:.|.:.::.|: ||:.:||.:.:.|.::.:||
  Rat   340 PNKAPVTYDALMEMEYLDMVVNESLRLYPIATRLDRVSKKDVEI-NGVFIPKGTVVTIPIYPLHR 403

  Fly   426 NPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKI--- 487
            ||:||..||||.||||..:|.....||.|:||..|.|||||.::|:..||..::.:|::|.|   
  Rat   404 NPEYWLEPEEFNPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALISMKLAVIGVLQNFNIQPC 468

  Fly   488 ----LPVIDPKSIVFQVGITLRFKNKIKVKLVRRN 518
                :|:...:..:||.      :..|.:|||.|:
  Rat   469 EKTQIPLKISRQPIFQP------EGPIILKLVSRD 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 CYP4 83..512 CDD:410721 104/471 (22%)
Cyp3a18NP_665725.2 CYP3A 67..492 CDD:410743 102/467 (22%)

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