DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp-42A1

DIOPT Version :10

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_507688.2 Gene:cyp-42A1 / 180236 WormBaseID:WBGene00013585 Length:511 Species:Caenorhabditis elegans


Alignment Length:520 Identity:154/520 - (29%)
Similarity:262/520 - (50%) Gaps:46/520 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ISVAILVVIHWIYKVNK-DYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCFDLLGKDTDQV 71
            |.:.|..:||:.::..| .||.|..|..          .:.:|:|..       |.......::.
 Worm     9 IVLTITWIIHFAFRKAKFIYNKLTVFQG----------PAALPLIGN-------FHQFHFSPEEF 56

  Fly    72 FTHLRQLA--KNSGDSYL-QYSMGFSNFNVI-DAHNAANILNHPNLITKGVIYNFLHPFLRTGVL 132
            |...:.:|  ...||..: :..:|...|.:: .||....||..|.::.|..:|.||..::..|:|
 Worm    57 FEQSQGIAYMMRKGDERITRVWLGGLPFVLLYGAHEVEAILGSPKMLNKPFLYGFLSAWIGDGLL 121

  Fly   133 TATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQFQGQ------NEVVVSLKDRISRFT 191
            .:...||..||.:||.|||.|||..|.|::.......:|:|:.|      ::|.    ..|:..|
 Worm   122 ISKPDKWRPRRKLLTPTFHYDILKDFVEVYNRHGRTLLSKFEAQAGTGEYSDVF----HTITLCT 182

  Fly   192 LNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYWDDCVYNMF-TGHKYNAALKVV 255
            |:.|||.|:|..::...:....|......:.:.:.:|::.|.|:.|.::|:. .|.:::..:|::
 Worm   183 LDVICEAALGTSINAQKDPHSPYLDAVFKMKDIVFQRLLRPHYFSDTIFNLIGPGKEHDECVKIL 247

  Fly   256 HEFSREIIAKRRVLLEEE--LENRRATQTADDDICVIRKKRFAMLDTLICAEKDGLIDDIGISEE 318
            |||:.:.|..|:..::..  :|...|.:||:.      ::|.|.||.::.....|.:...||.||
 Worm   248 HEFTSKAIYARKAKVDAAGGVEQLLAQETAEG------RRRMAFLDLMLDMNSKGELPMEGICEE 306

  Fly   319 VDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDLSNLNLSQLSKLNYLGYFIKE 383
            |||...||:||||..:.:.|..|......|....:||.|.:.:....::...|.||.||....||
 Worm   307 VDTFTFEGHDTTSAAMNWFLHLMGANPEIQSKVQKEIDEVLGEADRPVSYEDLGKLKYLEACFKE 371

  Fly   384 TMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHRNPKYWESPEEFRPERFLPQNCLK 448
            |:|||||:|::.||.:::.:: .|..||..:.:.:....:|::|:||:.||.|.||||:....  
 Worm   372 TLRLYPSVPLIARQCVEDIQV-RGHTLPSGTAVVMVPSMVHKDPRYWDDPEIFNPERFITGEL-- 433

  Fly   449 RHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKILPVI--DPKSIVFQVGITLRFKNKIK 511
            :|||||||||||.|||||.::||.|.|.::.:|||:.|:...:  |...:..::.|...:.|::|
 Worm   434 KHPYAYIPFSAGSRNCIGMRFAMMEEKCILAIILKNLKVKAKLRTDEMRVAAELIIRPLYGNELK 498

  Fly   512  511
             Worm   499  498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 CYP4 83..512 CDD:410721 140/442 (32%)
cyp-42A1NP_507688.2 CYP4 72..491 CDD:410721 136/431 (32%)

Return to query results.
Submit another query.