DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and Cyp4f13

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_570952.1 Gene:Cyp4f13 / 170716 MGIID:2158641 Length:523 Species:Mus musculus


Alignment Length:546 Identity:159/546 - (29%)
Similarity:243/546 - (44%) Gaps:112/546 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMICLLWISVAILV------------------VIHWIYKVNKDYNILAFFARRVQTKDGKPLDSL 47
            :.:||.|:.:..|.                  ::.|||         ||:....:.:        
Mouse     2 LQLCLSWLGMGSLTASPWHLLLLGGASWILARILAWIY---------AFYDNCSRLR-------- 49

  Fly    48 VPMIKGRTVFANCFDLLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFSNFNVIDAHN--------A 104
                        ||....|.: ..:.|| .|.||:     :.||.|......|.|:        .
Mouse    50 ------------CFPQPPKPS-WFWGHL-ALMKNN-----EESMQFITHLGHDFHDVHLSWVGPV 95

  Fly   105 ANILN--HPNLIT------------KGVIYNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDIL 155
            ..||.  |||.|.            :..:|.||.|:|..|:|.:...||...|.:||..||.|||
Mouse    96 YPILRLVHPNFIAPLLQASAAVAPKEMTLYGFLKPWLGDGLLMSAGDKWSHHRRLLTPAFHFDIL 160

  Fly   156 NQFQEIFIAESLKFVSQFQGQNEVVVS-------LKDRISRFTLNSICETAMGIKLDEMAEKGD- 212
            ..:.:||    .|.|:....:.:.:.|       :.:.||..||:|:.:....:  |...::.| 
Mouse   161 KSYVKIF----NKSVNIMHAKWQCLASKGTSRLDMFEHISLMTLDSLQKCIFSV--DSNCQESDS 219

  Fly   213 RYRANFHIIDEGLTRRIVNP-LYWDDCVYNMFTGHKYNAALKVVHEFSREIIAKRRVLLE----E 272
            :|.|....:...:.:|...| ||.|...|....|.::..|..:||.|:..:|.:||..|.    |
Mouse   220 KYIAAILELSSLVVKRHRQPFLYLDLLYYLTADGRRFRKACDLVHNFTDAVIKERRSTLNTQGVE 284

  Fly   273 ELENRRATQTADDDICVIRKKRFAMLDTLICAEKD---GLIDDIGISEEVDTLMAEGYDTTSIGL 334
            .|:.:..|:|.|            .:|.|:.||.:   ||.:: .|..|.||.|..|:|||:..|
Mouse   285 FLKAKAKTKTLD------------FIDVLLMAEDEHGKGLSNE-DIRAEADTFMFGGHDTTTSAL 336

  Fly   335 VFGLMNMSLYAAEQELCYQEIQEHILD-DLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQT 398
            .:.|.|::.:...||.|.||:||.:.| |...:....|::|.:|...|||::||:|.:.::.|..
Mouse   337 SWILYNLARHPEYQERCRQEVQELLRDRDSEEIEWDDLAQLPFLTMCIKESLRLHPPVLLISRCC 401

  Fly   399 LQETELENGLILPKRSQINIHVFDIHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRN 463
            .|:..|.:|..:||.:...|.:|.:|.||..|..||.:.|.||.|:|..||.|.|:||||||.||
Mouse   402 TQDVLLPDGRAIPKGNICVISIFGVHHNPSVWPDPEVYNPFRFDPENPQKRSPLAFIPFSAGTRN 466

  Fly   464 CIGQKYAMQEMKTLMVVILKHFKILP 489
            ||||.:||.|:|..:.:.|..|:|||
Mouse   467 CIGQTFAMSEIKVALALTLLRFRILP 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 148/466 (32%)
Cyp4f13NP_570952.1 p450 52..513 CDD:278495 148/467 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845319
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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