DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p2 and Cyp3a62

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001019403.1 Gene:Cyp3a62 / 170509 RGDID:1595919 Length:497 Species:Rattus norvegicus


Alignment Length:534 Identity:117/534 - (21%)
Similarity:230/534 - (43%) Gaps:96/534 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 WISVAILVVIHWIYKVNKDYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCFDLLGKDTDQV 71
            |:.:|.::|:.::|..:...|.     :::.....|||..:..::..|..|.. ||         
  Rat    12 WMLLATILVLLYLYGTSTHGNF-----KKLGISGPKPLPFVGNILAYRHGFWE-FD--------- 61

  Fly    72 FTHLRQLAKNSGDSYLQYSMGFSNFNVIDAHNAANILNHPNLITKGVIYNFLHPF---------- 126
                |...|..||.:     ||     .:.......:..|::|...::......|          
  Rat    62 ----RHCHKKYGDIW-----GF-----YEGRQPILAITDPDIIKTVLVKECYSTFTNRRSFGPAG 112

  Fly   127 -LRTGVLTATEKKWHTRRSMLTRTF-------HLDILNQFQEIFIAESLKFVSQFQGQNEVVVSL 183
             |:..:..:.:::|...|::|:.||       ...|:||:.::.: :::|    .:.:....:::
  Rat   113 ILKKAITLSEDEEWKRLRTLLSPTFTSGKLKEMFPIINQYADLLV-KNVK----HEAEKGNPITM 172

  Fly   184 KDRISRFTLNSICETAMGIKLDEMAEKGDRY------RANFHIIDEGLTRRIVNPLYWDDCVYNM 242
            ||....::::.|..|:.|:.:|.:....:.:      ...|:.:|......|:.|....  |:..
  Rat   173 KDIFGAYSMDVITGTSFGVNVDSLNNPQNPFVQKVKKLLKFNFLDPFFLSVILFPFLTP--VFEA 235

  Fly   243 FTGHKYNAALKVVHEFSREIIAKRRVLLEEELENRRATQTADDDICVIRKKRFAMLDTLICAEK- 306
            |.          :..|.::::...|..:|...|||...:.         |:|...|..:|.::. 
  Rat   236 FD----------ITVFPKDVMKFFRTSVERMKENRMQEKV---------KQRLDFLQLMINSQSS 281

  Fly   307 ------DGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDLSN 365
                  .||.|...:::.:..:.| ||:|||..|.|.|..::.:...|:....|| :..|.:.:.
  Rat   282 GDKESHQGLTDVEIVAQSIFFIFA-GYETTSSALSFALYLLATHPDLQKKLQDEI-DAALPNKAP 344

  Fly   366 LNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHRNPKYW 430
            :....|.::.||...:.||:||:|....:.|...::.|: ||:.:||.:.:.:..|.:|::||.|
  Rat   345 VTYDVLVEMEYLDMVLNETLRLFPVGGRLERVCKKDVEI-NGVFIPKGTVVMVPTFALHKDPKCW 408

  Fly   431 ESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKILPVIDPKS 495
            ..||||.||||..:|....:||.|:||..|.|||||.::|:..||..:|.:|::|..       .
  Rat   409 PEPEEFCPERFRKKNQDSINPYIYLPFGNGPRNCIGMRFALMNMKIALVRVLQNFSF-------G 466

  Fly   496 IVFQVGITLRFKNK 509
            :..:..|.|:.:.|
  Rat   467 LCKETQIPLKLRKK 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 105/478 (22%)
Cyp3a62NP_001019403.1 p450 39..491 CDD:278495 112/502 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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