DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4p2 and Cyp4v3

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:553 Identity:174/553 - (31%)
Similarity:264/553 - (47%) Gaps:84/553 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLW-----ISVA---ILVVIHWIYKVNKDYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCF 61
            |||     :|:|   ||:.|         :.:|..:||:.|....      :|.:      |..:
Mouse    14 LLWGAASAVSLAGATILISI---------FPMLVSYARKWQQMRS------IPSV------ARAY 57

  Fly    62 DLLGKDTDQVFTHLRQLAKNSGDSYLQ---YSMGFSNFNVI-------------DAHNAANILNH 110
            .|:|        |...:..|:.:.:.|   |:..|.:..:|             .|.|...||..
Mouse    58 PLVG--------HALYMKPNNAEFFQQLIYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTS 114

  Fly   111 PNLITKGVIYNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQFQG 175
            ...|.|..:|.||.|:|..|:||:|..||.|||.|||.|||..||..|.::...::...|::.:.
Mouse   115 SKQIDKSFLYKFLQPWLGLGLLTSTGSKWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEK 179

  Fly   176 Q-NEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYWDDCV 239
            . |:...:....|:...|:.|||||||..:...:.....|....:.:.:.:.||:..|..|.|..
Mouse   180 HVNQEAFNCFFYITLCALDIICETAMGKNIGAQSNNDSEYVRTVYRMSDMIYRRMKMPWLWFDLW 244

  Fly   240 YNMF-TGHKYNAALKVVHEFSREIIAKRRVLLEEELENRRATQT---ADDDICVIRKKRFAMLDT 300
            |.:| .|..:...||.:|.|:..:||:|       ::.|:|.:.   |.......:.||.|.||.
Mouse   245 YLVFKEGRDHKRGLKCLHTFTNNVIAER-------VKERKAEEDWTGAGRGPIPSKNKRKAFLDL 302

  Fly   301 LICA--EKDGLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDL 363
            |:..  |:...:....|.|||||.|.||:|||:..:     |.|||.....   .|:|..:..:|
Mouse   303 LLSVTDEEGNRLSQEDIREEVDTFMFEGHDTTAAAI-----NWSLYLLGTN---PEVQRKVDQEL 359

  Fly   364 SN--------LNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHV 420
            ..        :.|..|.||.||...||||:|::||:|:..|...::.|: .|..:.|.::..|..
Mouse   360 DEVFGRSHRPVTLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEV-GGYKVTKGTEAIIIP 423

  Fly   421 FDIHRNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHF 485
            :.:||:|:|:..|||||||||.|:|...||||||:|||||.|||||||:|:.|.||::..||:.|
Mouse   424 YALHRDPRYFPDPEEFRPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQF 488

  Fly   486 KILPVIDPKSIVFQVGITLRFKNKIKVKLVRRN 518
            .:......:.:.....:.||..|.|.:||.||:
Mouse   489 WVESNQKREELGLAGDLILRPNNGIWIKLKRRH 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 156/481 (32%)
Cyp4v3NP_598730.1 p450 51..517 CDD:278495 158/495 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167844954
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24291
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.950

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