DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp4v2.1

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_002934446.1 Gene:cyp4v2.1 / 100485929 XenbaseID:XB-GENE-22069503 Length:523 Species:Xenopus tropicalis


Alignment Length:547 Identity:166/547 - (30%)
Similarity:263/547 - (48%) Gaps:81/547 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLWISVAILVVIHWIYKVNKDYNILAF--------FARRVQTKDGKPLDSLVPMIKGRTVFANCF 61
            |:|::.|::::           .:||.        :.|:  .|..||:....|.          :
 Frog    10 LVWVAAAVVLL-----------TLLALSILPALQDYVRK--WKLMKPIPGPGPN----------Y 51

  Fly    62 DLLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFSNFN----------------VIDAHNAANILNH 110
            .::|   |.:|     |..|.||.:||......:|.                |..|.....||:.
 Frog    52 PIVG---DALF-----LKPNGGDFFLQMCEFTESFRSEPLIKIWIGPIPFIIVYHADTVEPILST 108

  Fly   111 PNLITKGVIYNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQFQG 175
            ...:.|...|.||||:|..|:||:|.:||.:||.|:|.|||..||::|.|:...:|...|.:.|.
 Frog   109 SKHMDKAYSYKFLHPWLGKGLLTSTGEKWRSRRKMITPTFHFAILSEFLEVMNEQSKILVEKLQK 173

  Fly   176 --QNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLTRRIVNPLYWDDC 238
              ..|......| ::...|:.|.|||||.|:...:.:...|....:.:.:.:.||...|..|.|.
 Frog   174 HVDGESFNCFMD-VTLCALDIISETAMGRKIQAQSNRDSEYVHAIYKMSDIIQRRQKMPWLWLDF 237

  Fly   239 VY-NMFTGHKYNAALKVVHEFSREIIAKRRVLLEEELENRRATQTADDDICVIRKKRFAMLDTLI 302
            .| .:..|.:::..||::|.|:.:.|.:|...|::..|.::....:|.: ....|||.|.||.|:
 Frog   238 FYAYLKDGKEHDKNLKILHAFTDKAILERAEELKKMGEQKKEHCDSDPE-SDKPKKRSAFLDMLL 301

  Fly   303 CAEKDGLIDDIG-------ISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHIL 360
            .|     .||.|       |.|||||.|.||:|||:..|.:.|..:..:...|...::|:.|...
 Frog   302 MA-----TDDAGNKMSYMDIREEVDTFMFEGHDTTAAALNWSLFLLGSHPEAQRQVHKELDEVFG 361

  Fly   361 DDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHR 425
            .....:.:..|.||.||...|||.:|:|||:|...|...::..: .|..:||...:.|..:.:||
 Frog   362 KSDRPVTMDDLKKLRYLEAVIKEALRIYPSVPFFARTVTEDCSI-RGFHVPKGVNVVIIPYALHR 425

  Fly   426 NPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKI--- 487
            :|:|:..|||||||||.|:|...|:||||||||||.||||||::|:.|.|.::..||:::.:   
 Frog   426 DPEYFPEPEEFRPERFFPENASGRNPYAYIPFSAGLRNCIGQRFALMEEKVVLSSILRNYWVEAS 490

  Fly   488 -----LPVIDPKSIVFQVGITLRFKNK 509
                 |.::....:..|.|:.::.||:
 Frog   491 QKREDLCLLGDLILRPQDGMWIKLKNR 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 156/481 (32%)
cyp4v2.1XP_002934446.1 p450 45..509 CDD:365848 154/489 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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