DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4p2 and cyp4b1

DIOPT Version :9

Sequence 1:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_001120073.1 Gene:cyp4b1 / 100145080 XenbaseID:XB-GENE-5924259 Length:510 Species:Xenopus tropicalis


Alignment Length:547 Identity:159/547 - (29%)
Similarity:248/547 - (45%) Gaps:92/547 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MICLLWISVAILVVIHWIYKVNK-DYNILAFF--------------ARRVQTKDGKPLDSLVPMI 51
            ::|||    |:|:....:|...| ..||...|              .||    |||.||.||.  
 Frog    22 LLCLL----AVLLKATQLYLSQKRQENIFKQFPGPPRHWLLGNVDQIRR----DGKDLDLLVN-- 76

  Fly    52 KGRTVFANCFDLLGKDTDQVFTHLRQLAKNSGDSYLQYSMGFSNFNVIDAHNAANILNHPNLI-- 114
                                :||     ||.|    .:.:.|.||      ::...|.||:..  
 Frog    77 --------------------WTH-----KNGG----AFPVWFGNF------SSFLFLTHPDYAKV 106

  Fly   115 -------TKGVIYNFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFVSQ 172
                   ...:.|:||.|::..|:|..|..||...|.:||..||.|:|..:..:....:...:..
 Frog   107 IFGREEPKSSISYDFLVPWIGKGLLVLTGPKWFQHRRLLTPGFHYDVLKPYVNLISKCTTDMLDN 171

  Fly   173 FQG--QNEVVVSLKDRISRFTLNSICETAMGIKLDEMAEKGDRY-RANFHIIDEGLTRRIVNPLY 234
            ::.  ..:..|.|...:|..||:||.:.|.....:...:..:.| :|.|.:......|....|.:
 Frog   172 WEKLITKQKTVELFQHLSLMTLDSIMKCAFSYDSNCQKDSNNAYIKAVFDLSYVANLRLRCFPYH 236

  Fly   235 WDDCVYNMFTGHKYNAALKVVHEFSREIIAKRR--VLLEEELENRRATQTADDDICVIRKKRFAM 297
            .|...|....|:::..|.::.||.:.::|.:|:  :.||:|||.            :.:|:....
 Frog   237 NDTVFYLSPHGYRFRKACRITHEHTDKVIQQRKESMKLEKELEK------------IQQKRHLDF 289

  Fly   298 LDTLICAEKD---GLIDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHI 359
            ||.|:.|..:   ||.|| .:..||||.|.||:|||:.|:.:.|..|:.|...|:.|.:||:| :
 Frog   290 LDILLFARDEKGHGLSDD-DLRAEVDTFMFEGHDTTASGISWILYCMAKYPEHQQKCREEIKE-V 352

  Fly   360 LDDLSNLNLSQLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIH 424
            |.|...:....|.|:.|....|||::|:||.:|.:.||........:|..:|..:.|.:.::.||
 Frog   353 LGDRQIMEWEDLGKIPYTNMCIKESLRMYPPVPGVARQLRNPVTFFDGRSVPAGTLIGLSIYAIH 417

  Fly   425 RNPKYWESPEEFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKILP 489
            :||..||.||.|.|.||.|:|...||.:|::||:||.||||||.:||.|||..:.:.|..|.:.|
 Frog   418 KNPAVWEDPEVFNPLRFSPENSANRHSHAFLPFAAGPRNCIGQNFAMNEMKVAVALTLNRFHLAP 482

  Fly   490 VIDPKSIVFQVGITLRFKNKIKVKLVR 516
            .::...|... .:.|:.||.|.|.|.:
 Frog   483 DLENPPIKIP-QLVLKSKNGIHVHLTK 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 139/467 (30%)
cyp4b1NP_001120073.1 p450 50..503 CDD:278495 146/508 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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