DRSC/TRiP Functional Genomics Resources

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Protein Alignment VhaAC45 and Atp6ap1

DIOPT Version :9

Sequence 1:NP_610470.1 Gene:VhaAC45 / 35944 FlyBaseID:FBgn0262515 Length:379 Species:Drosophila melanogaster
Sequence 2:NP_113973.2 Gene:Atp6ap1 / 83615 RGDID:620423 Length:463 Species:Rattus norvegicus


Alignment Length:473 Identity:115/473 - (24%)
Similarity:184/473 - (38%) Gaps:131/473 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLWKSLIALCVIGAAVA--EQTPVFLWGAN-SVAKPSLKT-----VSQVEFAEQLAALLE--DHM 55
            :|| .|::|..:.||||  :|.|:.||.:: .:..|...|     .|.::.:..|...||  ...
  Rat    19 VLW-LLLSLVAVAAAVAAEQQVPLVLWSSDRDLWAPVADTHEGHITSDMQLSTYLDPALELGPRN 82

  Fly    56 VVAFEENGLSSKDFLCSNSQAQSCYAQLQGVSPKTYYTSVENPSEALRSVAAKREHNSID--ASG 118
            |:.|.::.||.:||        :.|..:.|....:.::::||   ||....:.....::|  |..
  Rat    83 VLLFLQDKLSIEDF--------TAYGGVFGNKQDSAFSNLEN---ALDLAPSSLVLPAVDWYAIS 136

  Fly   119 KLTTPAKCAVGTA---------------------LFVTFEDAAES-----REASLESHDAAIAAI 157
            .|||..:..:|.:                     |.:.....|.|     ||. |..:|..|..:
  Rat   137 TLTTYLQEKLGASPLHVDLATLKELKLNASLPALLLIRLPYTASSGLMAPREV-LTGNDEVIGQV 200

  Fly   158 SKQFECK----VAYLYLAAPSTAPVVQRRTRRDTAATTGG------------------------- 193
            ....|.:    .|.|....||       |..||.|...||                         
  Rat   201 LSTLESEDVPYTAALTAVRPS-------RVARDVAMVAGGLGRQLLQTQVASPAIHPPVSYNDTA 258

  Fly   194 ---IMWKSTNQFQIFY-------TALLYNGNPITVTDLKLT----NSSSTKLSVVMDTSVADKPI 244
               :.|  ...|.:.|       |:|.:.     |.:|.||    |.|...||:..: .:....:
  Rat   259 PRILFW--AQNFSVAYKDEWKDLTSLTFG-----VENLNLTGSFWNDSFAMLSLTYE-PLFGATV 315

  Fly   245 TFDVVYNGGY--------FSLSNLVYDNN----NFRSSGVNAPTTFSYSC---GNLTLE-SAAVN 293
            ||..:....:        |::..|...:|    :|..|.|..|:.:|:.|   .:|:.: |..|.
  Rat   316 TFKFILASRFYPVSARYWFTMERLEIHSNGSVAHFNVSQVTGPSIYSFHCEYVSSLSKKGSLLVT 380

  Fly   294 NMYN--TLSFKSLQLQAPFDGTYKEDFPFGDSWDCVGFVTPGILMGLFVVALLLVIMFVGVCWMM 356
            |:.:  .::..:.|:|| |:.| .|.|.:..  ||.||.:|||.|||.....:|.|...|:..::
  Rat   381 NVPSLWQMTLHNFQIQA-FNVT-GEQFSYAS--DCAGFFSPGIWMGLLTTLFMLFIFTYGLHMIL 441

  Fly   357 DINTMDRFDDPKGKTITI 374
            .:.|||||||.||.|||:
  Rat   442 SLKTMDRFDDHKGPTITL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VhaAC45NP_610470.1 ATP-synt_S1 244..376 CDD:368630 47/149 (32%)
Atp6ap1NP_113973.2 ATP-synt_S1 315..461 CDD:399083 47/149 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341987
Domainoid 1 1.000 63 1.000 Domainoid score I10009
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1111170at2759
OrthoFinder 1 1.000 - - FOG0002234
OrthoInspector 1 1.000 - - oto96285
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12471
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4338
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.040

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